ggKbase home page

sw_12_scaffold_265

Search features with annotation key words

Displaying items 1-30 of 46 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_265_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..646)
DNA (645bp) protein (215aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQG6_9EURY
Enoyl-CoA hydratase {ECO:0000313|EMBL:EMA47876.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
sw_12_scaffold_265_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

938..1531
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MES9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44231.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_265_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1816..4044
DNA (2229bp) protein (743aa)
Sucrose-6-phosphate hydrolase n=1 Tax=Halogranum salarium B-1 RepID=J3EV78_9EURY
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EJN58472.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sucrose-6-phosphate hydrolase
sw_12_scaffold_265_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4151..5509)
DNA (1359bp) protein (453aa)
Levansucrase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DH53_9EURY
Levansucrase {ECO:0000313|EMBL:ELZ34027.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
levansucrase
sw_12_scaffold_265_5
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5660..6154)
DNA (495bp) protein (165aa)
DNA binding protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LD71_9EURY
DNA binding protein {ECO:0000313|EMBL:EMA31053.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 1087
DNA binding protein
sw_12_scaffold_265_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6431..8263
DNA (1833bp) protein (611aa)
cytochrome c oxidase subunit i (EC:1.9.3.1)
Cytochrome C oxidase subunit I n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFP8_9EURY
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:EMA44203.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
sw_12_scaffold_265_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8314..9447)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49454.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_265_8
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9486..9902
DNA (417bp) protein (139aa)
Glycosyl transferase family 2 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZ12_HALTV
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADB61980.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica
sw_12_scaffold_265_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9902..10213
DNA (312bp) protein (104aa)
Glutaredoxin n=1 Tax=Halogranum salarium B-1 RepID=J3JCS1_9EURY
Glutaredoxin {ECO:0000313|EMBL:EJN56861.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_265_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10276..10542)
DNA (267bp) protein (89aa)
KEOPS complex Pcc1-like subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC53_9EURY
KEOPS complex Pcc1-like subunit {ECO:0000313|EMBL:EMA55431.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
rpo operon protein
sw_12_scaffold_265_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10577..10711)
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit p (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
DNA-directed RNA polymerase subunit P n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSL7_HALBP
sw_12_scaffold_265_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10743..11015)
DNA (273bp) protein (91aa)
50S ribosomal protein L37Ae n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSL6_HALBP
50S ribosomal protein L37ae
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
sw_12_scaffold_265_13
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11136..11861)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V1L9_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46583.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_12_scaffold_265_14
unknown

Not on your lists

comp(11952..12191)
DNA (240bp) protein (80aa)

This feature has no annotations

sw_12_scaffold_265_15
unknown

Not on your lists

comp(12246..12542)
DNA (297bp) protein (99aa)

This feature has no annotations

sw_12_scaffold_265_16
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12771..14291)
DNA (1521bp) protein (507aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XFW3_9EURY
tRNA pseudouridine synthase D
sw_12_scaffold_265_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14482..14820)
DNA (339bp) protein (113aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:ESP89680.1}; EC=3.1.1.29 {ECO:0000313|EMBL:ESP89680.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candi
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HG37_9EURY
sw_12_scaffold_265_18
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14980..15738
DNA (759bp) protein (253aa)
Probable deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL
Probable deoxycytidine triphosphate deaminase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VKZ5_9EURY
deoxycytidine triphosphate deaminase
sw_12_scaffold_265_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15735..16685
DNA (951bp) protein (317aa)
Phosphomethylpyrimidine kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQH0_9EURY
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EMA46725.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
phosphomethylpyrimidine kinase
sw_12_scaffold_265_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16725..17429
DNA (705bp) protein (235aa)
Methyltransferase type 11 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSM5_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA36537.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
Methyltransferase type 11
sw_12_scaffold_265_21
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17614..18063
DNA (450bp) protein (150aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3L3_HALJB
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADJ15320.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" sou
sw_12_scaffold_265_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18168..18335)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NAZ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55006.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_265_23
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18462..19781
DNA (1320bp) protein (440aa)
Formyl-CoA transferase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X352_9EURY
Formyl-CoA transferase {ECO:0000313|EMBL:ELY56150.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
Formyl-CoA transferase
sw_12_scaffold_265_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19886..20695)
DNA (810bp) protein (270aa)
N-acetyltransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY11_9EURY
N-acetyltransferase {ECO:0000313|EMBL:EFW90477.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus D
arylamine n-acetyltransferase
sw_12_scaffold_265_25
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21013..21990
DNA (978bp) protein (326aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JLR8_NATP1
putative nucleoside-diphosphate sugar epimerase
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AGB31778.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;"
sw_12_scaffold_265_26
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22175..23497
DNA (1323bp) protein (441aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PMN4_9EURY
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EMA71183.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
acyl-CoA dehydrogenase
sw_12_scaffold_265_27
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23660..24124
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93512.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_12_scaffold_265_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24313..24678)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPN2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46689.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_265_29
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24938..25558
DNA (621bp) protein (207aa)
Thiol-disulfide isomerase/thioredoxin n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5R8_9EURY
Thiol-disulfide isomerase/thioredoxin {ECO:0000313|EMBL:EMA39964.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
alkyl hydroperoxide reductase subunit C / thiol-specific antioxidant family protein
sw_12_scaffold_265_30
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25724..26455
DNA (732bp) protein (244aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QV11_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW91529.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
Displaying items 1-30 of 46 in total

View Taxonomy