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sw_12_scaffold_314

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_314_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..302)
DNA (300bp) protein (100aa)
Short-chain family oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C9S0_9EURY
Short-chain family oxidoreductase {ECO:0000313|EMBL:ELZ19980.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carls
short-chain dehydrogenase/reductase SDR
sw_12_scaffold_314_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

452..1339
DNA (888bp) protein (296aa)
SMP-30/gluconolaconase/LRE-like region-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNY6_9EURY
SMP-30/gluconolaconase/LRE-like region-containing protein {ECO:0000313|EMBL:ELZ24102.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" s
SMP-30/gluconolaconase/LRE-like region-containing protein
sw_12_scaffold_314_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1393..2406)
DNA (1014bp) protein (338aa)
Mannonate dehydratase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLI5_9EURY
Mannonate dehydratase {ECO:0000313|EMBL:ELZ24101.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
Mannonate dehydratase
sw_12_scaffold_314_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2603..2959
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DB08_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ32636.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
sw_12_scaffold_314_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3024..3914)
DNA (891bp) protein (297aa)
Amidohydrolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DD24_9EURY
Amidohydrolase {ECO:0000313|EMBL:ELZ32637.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
hypothetical protein
sw_12_scaffold_314_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3911..4714)
DNA (804bp) protein (268aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEH38964.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEH38964.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrial
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DD75_HALXS
sw_12_scaffold_314_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5848..6123)
DNA (276bp) protein (92aa)
Glutaredoxin n=2 Tax=Haloarcula hispanica RepID=G0HW60_HALHT
grx; glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AHB65293.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
sw_12_scaffold_314_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6243..6737
DNA (495bp) protein (165aa)
Peroxiredoxin-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6M5_9EURY
Peroxiredoxin-like protein {ECO:0000313|EMBL:EMA52789.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
homolog to peroxiredoxin
sw_12_scaffold_314_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6800..9451)
DNA (2652bp) protein (884aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP82_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46524.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
rnd superfamily exporter
sw_12_scaffold_314_10
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9822..10811
DNA (990bp) protein (330aa)
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VWE8_9EURY
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:ELY41495.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natron
sw_12_scaffold_314_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11051..11821
DNA (771bp) protein (257aa)
Putative phosphate permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9C0_9EURY
Putative phosphate permease {ECO:0000313|EMBL:EMA53704.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
pitA; putative phosphate permease
sw_12_scaffold_314_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11925..12686)
DNA (762bp) protein (254aa)
HAD-superfamily hydrolase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4L7_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:EMA52034.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis
haloacid dehalogenase superfamily enzyme, subfamily IA
sw_12_scaffold_314_13
unknown

Not on your lists

comp(12683..13351)
DNA (669bp) protein (223aa)

This feature has no annotations

sw_12_scaffold_314_14
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13431..14570)
DNA (1140bp) protein (380aa)
Beta-lactamase domain protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y7K9_9EURY
Beta-lactamase domain protein {ECO:0000313|EMBL:ELY70009.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 104
Zn-dependent hydrolase, glyoxylase
sw_12_scaffold_314_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14757..15575
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2Z932_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57140.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
alpha/beta hydrolase fold protein
sw_12_scaffold_314_16

Not on your lists

16798..17013
DNA (216bp) protein (72aa)
Nitrate/nitrite transporter n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZPK4_9ARCH
Nitrate/nitrite transporter {ECO:0000313|EMBL:ESS04555.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_12_scaffold_314_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17207..18256
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N424_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52611.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_314_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18502..20271
DNA (1770bp) protein (590aa)
Thiamine pyrophosphate domain-containing TPP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI99_9EURY
thiamine pyrophosphate protein TPP binding domain-containing protein
Thiamine pyrophosphate domain-containing TPP-binding protein {ECO:0000313|EMBL:EMA45416.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
sw_12_scaffold_314_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20824..21066)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N744_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53378.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_314_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21106..21837
DNA (732bp) protein (244aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSG7_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW92376.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
sw_12_scaffold_314_21
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22061..23233)
DNA (1173bp) protein (391aa)
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:CCH52927.1}; EC=4.2.1.6 {ECO:0000313|EMBL:CCH52927.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyto
Mandelate racemase/muconate lactonizing protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GGA2_9BACT
Mandelate racemase
sw_12_scaffold_314_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23350..24009)
DNA (660bp) protein (220aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HNA0_9EURY
dimethylmenaquinone methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dimethylmenaquinone methyltransferase
sw_12_scaffold_314_23
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24139..24924
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6J1_HALJB
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADJ13868.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalka
sw_12_scaffold_314_24

Not on your lists

comp(24969..26270)
DNA (1302bp) protein (434aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:AEN07014.1}; EC=5.4.3.8 {ECO:0000313|EMBL:AEN07014.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=halophilic archaeon DL31 RepID=G2MNN6_9ARCH
sw_12_scaffold_314_25
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26369..26599
DNA (231bp) protein (77aa)
mandelate racemase/muconate lactonizing protein id=24613559 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ESP90192.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" s
hypothetical protein
sw_12_scaffold_314_26
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26671..26889)
DNA (219bp) protein (73aa)
Transposase IS4 family protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XP75_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:ELY63347.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10
sw_12_scaffold_314_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26891..27358)
DNA (468bp) protein (156aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGS6_9EURY
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:EMA44932.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
protein-tyrosine-phosphatase
sw_12_scaffold_314_28
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27372..28535)
DNA (1164bp) protein (388aa)
Arsenical-resistance protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZZ9_9EURY
Arsenical-resistance protein {ECO:0000313|EMBL:EMA37705.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
arsenical-resistance protein
sw_12_scaffold_314_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28528..28926)
DNA (399bp) protein (133aa)
Transcriptional regulator, ArsR family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJM9_9EURY
Transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:EMA44934.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
regulatory protein ArsR
sw_12_scaffold_314_30
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29311..29487
DNA (177bp) protein (59aa)
Endoribonuclease L-PSP n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFC6_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:EMA56677.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
putative translation initiation inhibitor, yjgF family protein
Displaying items 1-30 of 35 in total

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