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sw_12_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_39_1
Haloferax mediterranei, Haloferax, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

248..1174
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=M0IKZ3_HALMT
sw_12_scaffold_39_2
unknown

Not on your lists

comp(1493..1663)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_12_scaffold_39_3
unknown

Not on your lists

2005..2181
DNA (177bp) protein (59aa)

This feature has no annotations

sw_12_scaffold_39_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2357..3079
DNA (723bp) protein (241aa)
Phenol hydroxylase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWS0_9EURY
Phenol hydroxylase {ECO:0000313|EMBL:EMA37921.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
hmp; phenol hydroxylase
sw_12_scaffold_39_5
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3251..4429
DNA (1179bp) protein (393aa)
Polysaccharide deacetylase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WX78_9EURY
Polysaccharide deacetylase {ECO:0000313|EMBL:ELY52963.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermo
putative xylanase/chitin deacetylase
sw_12_scaffold_39_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4518..5756)
DNA (1239bp) protein (413aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQZ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93412.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_12_scaffold_39_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5757..6788)
DNA (1032bp) protein (344aa)
ABC transporter related protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QV15_9EURY
ABC transporter related protein {ECO:0000313|EMBL:EFW91533.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
ABC transporter
sw_12_scaffold_39_8
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6944..7132)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HQJ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ82178.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_12_scaffold_39_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7596..9581
DNA (1986bp) protein (662aa)
HTR-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMF3_9EURY
HTR-like protein {ECO:0000313|EMBL:ELZ23562.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
htlD; HTR-like protein
sw_12_scaffold_39_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9635..10696)
DNA (1062bp) protein (354aa)
Peptidase A24B, FlaK domain-containing protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JIF3_HALVA
Peptidase A24B, FlaK domain-containing protein {ECO:0000313|EMBL:EMA08133.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloa
Peptidase A24B, FlaK domain protein
sw_12_scaffold_39_11
unknown

Not on your lists

comp(10945..11424)
DNA (480bp) protein (160aa)

This feature has no annotations

sw_12_scaffold_39_12
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12054..12443)
DNA (390bp) protein (130aa)
Ferredoxin n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AHL5_NATGS
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AFZ72939.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (strain ATCC 43
sw_12_scaffold_39_13
unknown

Not on your lists

12896..13051
DNA (156bp) protein (52aa)

This feature has no annotations

sw_12_scaffold_39_14
unknown

Not on your lists

13240..13437
DNA (198bp) protein (66aa)

This feature has no annotations

sw_12_scaffold_39_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13570..14643)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGV2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44952.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_39_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14670..14879
DNA (210bp) protein (70aa)
Thioesterase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JAP8_HALVA
thioesterase
Thioesterase {ECO:0000313|EMBL:EMA05074.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
sw_12_scaffold_39_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14985..16139)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N234_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51563.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_39_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16595..17812)
DNA (1218bp) protein (406aa)
Proteasome-activating nucleotidase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7C1_9EURY
Proteasome-activating nucleotidase {ECO:0000313|EMBL:EMA53004.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thail
pan1; proteasome-activating nucleotidase
sw_12_scaffold_39_19
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17938..19728)
DNA (1791bp) protein (597aa)
Oligoendopeptidase F n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHY5_9EURY
Oligoendopeptidase F {ECO:0000313|EMBL:EMA19435.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 135
oligopeptidase PepB
sw_12_scaffold_39_20
unknown

Not on your lists

19962..20366
DNA (405bp) protein (135aa)

This feature has no annotations

sw_12_scaffold_39_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20540..21988
DNA (1449bp) protein (483aa)
Peptidase M28 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3R6_9EURY
Peptidase M28 {ECO:0000313|EMBL:EMA52188.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
peptidase M28
sw_12_scaffold_39_22
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22071..22478
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JF17_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58831.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_12_scaffold_39_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22552..23355)
DNA (804bp) protein (268aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=2 Tax=Halococcus hamelinensis RepID=M0M467_9EURY
tRNA pseudouridine synthase A
sw_12_scaffold_39_24
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(23361..24677)
DNA (1317bp) protein (439aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000313|EMBL:EMA37038.1};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LV72_9EURY
sw_12_scaffold_39_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24829..25542)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0K3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39206.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_39_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25658..26017)
DNA (360bp) protein (120aa)
DNA-binding protein C449_14252 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBJ3_9EURY
DNA-binding protein C449_14252 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
hypothetical protein
sw_12_scaffold_39_27
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26226..27221)
DNA (996bp) protein (332aa)
Phenazine biosynthesis protein PhzF family n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQT2_9EURY
Phenazine biosynthesis protein {ECO:0000313|EMBL:KDE56921.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56
phenazine biosynthesis protein PhzF family
sw_12_scaffold_39_28
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(27287..27742)
DNA (456bp) protein (152aa)
30S ribosomal protein S19e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4J6_9EURY
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
ribosomal protein S19E (S16A)
sw_12_scaffold_39_29
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27915..28934)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8Q4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40790.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_39_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29079..29951
DNA (873bp) protein (291aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCF8_9EURY
Thiamine-monophosphate kinase {ECO:0000313|EMBL:EMA55652.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
Displaying items 1-30 of 36 in total

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