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sw_12_scaffold_402

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_402_1
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..1117
DNA (1116bp) protein (372aa)
RNA methylase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CJV0_9EURY
RNA methylase {ECO:0000313|EMBL:ELZ22918.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
RNA methyltransferase
sw_12_scaffold_402_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1147..1557)
DNA (411bp) protein (137aa)
Ferredoxin n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P2B2_9EURY
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KDS90397.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
sw_12_scaffold_402_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2303..3337)
DNA (1035bp) protein (345aa)
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7H6_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
Transcription factor TFIIB cyclin-related protein
sw_12_scaffold_402_4
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3596..4315
DNA (720bp) protein (240aa)
Transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9S1_HALMT
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFK20981.1}; Transcriptional regulator {ECO:0000313|EMBL:AHZ24155.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
sw_12_scaffold_402_5
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4450..4911
DNA (462bp) protein (154aa)
Transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9S1_HALMT
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFK20981.1}; Transcriptional regulator {ECO:0000313|EMBL:AHZ24155.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
sw_12_scaffold_402_6
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5061..5759
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C1M9_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ17181.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
short-chain dehydrogenase/reductase SDR rbh
sw_12_scaffold_402_7
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5998..6657)
DNA (660bp) protein (220aa)
Response regulator n=6 Tax=Haloferax RepID=L5NYI0_9EURY
Sensor histidine kinase TmoS {ECO:0000313|EMBL:CQR50244.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
response regulator
sw_12_scaffold_402_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6847..8775
DNA (1929bp) protein (643aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS sensor histidine kinase n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1MVK2_9EURY
PAS sensor histidine kinase {ECO:0000313|EMBL:ERG94419.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J0
sw_12_scaffold_402_9
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8932..10053)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F762_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55042.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_12_scaffold_402_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10056..11135)
DNA (1080bp) protein (360aa)
DNA primase small subunit PriS {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00011001}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00044138};; TaxID=931277 species="Arc
pri1; DNA primase small subunit (EC:2.7.7.-)
DNA primase small subunit PriS n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MC27_HALMO
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