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sw_12_scaffold_407

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_407_1

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comp(3..176)
DNA (174bp) protein (58aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210
Carbamoyl-phosphate synthase large chain n=1 Tax=uncultured archaeon A07HB70 RepID=V4XBG2_9ARCH
carbamoyl-phosphate synthase large subunit
sw_12_scaffold_407_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(436..663)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3S5_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47747.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_407_3
unknown

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697..1095
DNA (399bp) protein (133aa)

This feature has no annotations

sw_12_scaffold_407_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(916..1446)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2K0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51748.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_407_5
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1497..1679)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YXP5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD53582.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
sw_12_scaffold_407_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1813..2229)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IYZ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88342.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_12_scaffold_407_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2657..4159
DNA (1503bp) protein (501aa)
yidJ; arylsulfatase (EC:3.1.6.1)
Sulfatase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MTZ4_9EURY
Sulfatase {ECO:0000313|EMBL:EMA48239.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
sw_12_scaffold_407_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4260..5315)
DNA (1056bp) protein (352aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
Predicted protein n=2 Tax=Hordeum vulgare RepID=F2CXY7_HORVD
Uncharacterized protein {ECO:0000313|EMBL:ETX00953.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
sw_12_scaffold_407_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5603..6838
DNA (1236bp) protein (412aa)
Capsular polysaccharide biosynthesis protein-like protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NM43_HALUD
Capsular polysaccharide biosynthesis protein-like protein
Capsular polysaccharide biosynthesis protein-like protein {ECO:0000313|EMBL:ACV11251.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" s
sw_12_scaffold_407_10
unknown

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6932..7051
DNA (120bp) protein (40aa)

This feature has no annotations

sw_12_scaffold_407_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7716..8975)
DNA (1260bp) protein (420aa)
NADH oxidase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHY9_9EURY
NADH oxidase {ECO:0000313|EMBL:EMA44020.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
NAD(P)H-nitrite reductase
sw_12_scaffold_407_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9141..9755
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44019.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_407_13
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9858..11042
DNA (1185bp) protein (395aa)
Hef nuclease n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WZM2_9EURY
ERCC4 domain-containing protein
Hef nuclease {ECO:0000313|EMBL:ELY54842.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus JCM 1
sw_12_scaffold_407_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11011..12276
DNA (1266bp) protein (422aa)
Hef nuclease n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M687_9EURY
Hef nuclease
Hef nuclease {ECO:0000313|EMBL:EMA40124.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
sw_12_scaffold_407_15
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12353..13300)
DNA (948bp) protein (316aa)
crtB; geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene synthase) (EC:2.5.1.32)
Phytoene/squalene synthetase n=1 Tax=Halonotius sp. J07HN4 RepID=U1PAG4_9EURY
Phytoene/squalene synthetase {ECO:0000313|EMBL:ERH06999.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
sw_12_scaffold_407_trna_1
unknown

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13647..13720
DNA (74bp)
transferRNA
Displaying 16 items

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