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sw_12_scaffold_440

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_440_1
unknown

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comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

sw_12_scaffold_440_2
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(224..1096)
DNA (873bp) protein (291aa)
ABC-type sugar transport system, permease component n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KBM5_HALHC
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJF16827.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" sour
ABC-type sugar transport system, permease component
sw_12_scaffold_440_3
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1098..2051)
DNA (954bp) protein (318aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYQ5_THEOJ
carbohydrate ABC transporter membrane protein 1, CUT1 family
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ADL08479.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Famil
sw_12_scaffold_440_4
Thermosipho africanus, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

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2361..3728
DNA (1368bp) protein (456aa)
Trehalose/maltose binding protein (Fragment) n=1 Tax=Thermosipho africanus H17ap60334 RepID=K2PJ88_9THEM
Trehalose/maltose binding protein {ECO:0000313|EMBL:EKF50279.1}; Flags: Fragment;; TaxID=1161912 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho
trehalose/maltose binding protein
sw_12_scaffold_440_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3890..4975)
DNA (1086bp) protein (362aa)
Xylose dehydrogenase (NAD/NADP) n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MH44_HALMO
Xylose dehydrogenase (NAD/NADP) {ECO:0000313|EMBL:EMA45047.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae
xylose dehydrogenase (NAD/NADP)
sw_12_scaffold_440_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5157..6413
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIJ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45188.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_440_7
unknown

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7064..7627
DNA (564bp) protein (188aa)

This feature has no annotations

sw_12_scaffold_440_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7982..8248
DNA (267bp) protein (89aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPK8_9EURY
phosphoribosylformylglycinamidine synthase PurS
sw_12_scaffold_440_9
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8245..8931
DNA (687bp) protein (229aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000
purQ; phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=3 Tax=Haloferax RepID=M0F915_9EURY
sw_12_scaffold_440_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9040..9369
DNA (330bp) protein (110aa)
ABC transporter-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M543_9EURY
ABC transporter-like protein {ECO:0000313|EMBL:EMA39754.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
ABC transporter
sw_12_scaffold_440_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9409..10794
DNA (1386bp) protein (462aa)
ABC transporter-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M543_9EURY
ABC transporter-like protein {ECO:0000313|EMBL:EMA39754.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
ABC transporter-like protein
sw_12_scaffold_440_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11184..12470
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A3Y2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60123.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_440_13
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12473..13579
DNA (1107bp) protein (369aa)
hypothetical protein id=24621872 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Fe2+ transport protein {ECO:0000313|EMBL:ERH02318.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
fe2+ transport protein
sw_12_scaffold_440_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13592..14185)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSB7_HALMO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA48263.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
Displaying 14 items

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