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sw_12_scaffold_540

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_540_1
unknown

Not on your lists

2..511
DNA (510bp) protein (170aa)

This feature has no annotations

sw_12_scaffold_540_2
unknown

Not on your lists

719..1060
DNA (342bp) protein (114aa)

This feature has no annotations

sw_12_scaffold_540_3
unknown

Not on your lists

1054..1359
DNA (306bp) protein (102aa)

This feature has no annotations

sw_12_scaffold_540_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1550..2608
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYQ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50857.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_540_5

Not on your lists

3323..3889
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Micromonas pusilla virus 12T RepID=M4QRM6_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AGH30974.1}; TaxID=755272 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses.;" source="Micromonas pusilla virus 12T.;"
PKD domain-containing protein
sw_12_scaffold_540_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4307..4669)
DNA (363bp) protein (121aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N001_9EURY
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:EMA50878.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
sw_12_scaffold_540_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6016..6732)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HPJ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP89814.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_12_scaffold_540_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7708..9783)
DNA (2076bp) protein (692aa)
PBS lyase HEAT-like repeat domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN57_9EURY
PBS lyase HEAT-like repeat domain-containing protein {ECO:0000313|EMBL:EMA45880.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
HEAT repeat-containing protein, PBS lyase-like
sw_12_scaffold_540_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9970..10713)
DNA (744bp) protein (248aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMB3_9EURY
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:EMA45879.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
sw_12_scaffold_540_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10854..11267
DNA (414bp) protein (138aa)
Blue (Type 1) copper domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MTA0_HALMO
Blue (Type 1) copper domain-containing protein {ECO:0000313|EMBL:EMA47700.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
hcp2; halocyanin
sw_12_scaffold_540_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11359..12063)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54629.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_540_12
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12315..12950)
DNA (636bp) protein (212aa)
30S ribosomal protein S3Ae n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZSK7_9EURY
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=1227493 species="Archaea; Euryarchaeota; Hal
30S ribosomal protein S3Ae
sw_12_scaffold_540_13
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12975..13415)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NWI4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA61918.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_12_scaffold_540_14
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13412..14833)
DNA (1422bp) protein (474aa)
Exonuclease RecJ n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PJ96_9EURY
Exonuclease RecJ {ECO:0000313|EMBL:EMA69694.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
exonuclease RecJ
sw_12_scaffold_540_15
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14834..15298)
DNA (465bp) protein (155aa)
30S ribosomal protein S15 n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UG10_HALBP
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borin
rps15p; 30S ribosomal protein S15P
sw_12_scaffold_540_trna_1
unknown

Not on your lists

15635..15706
DNA (72bp)
transferRNA
Displaying 16 items

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