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sw_12_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 69 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_70_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..949)
DNA (948bp) protein (316aa)
Spfh domain, band 7 family protein n=1 Tax=Halogranum salarium B-1 RepID=J3JH56_9EURY
Spfh domain, band 7 family protein {ECO:0000313|EMBL:EJN60699.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
spfh domain, band 7 family protein
sw_12_scaffold_70_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1103..2140)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NES0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55190.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_70_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2340..2807)
DNA (468bp) protein (156aa)
Ferritin Dps family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKK3_9EURY
Ferritin Dps family protein {ECO:0000313|EMBL:EMA44965.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
dpsA2; ferritin / Dps domain protein
sw_12_scaffold_70_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2977..4911)
DNA (1935bp) protein (645aa)
UvrABC system protein C n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GWK1_9EURY
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1324957 species="A
UvrABC system protein C
sw_12_scaffold_70_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5075..6649)
DNA (1575bp) protein (525aa)
IclR-like transcriptional regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDD7_9EURY
IclR-like transcriptional regulator {ECO:0000313|EMBL:EMA55094.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
hypothetical protein
sw_12_scaffold_70_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6886..7887
DNA (1002bp) protein (334aa)
ABC transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N079_9EURY
ABC transporter {ECO:0000313|EMBL:EMA51276.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ABC transporter, ATP-binding protein
sw_12_scaffold_70_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7884..8729
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTC3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91852.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
ABC-2 type transporter
sw_12_scaffold_70_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8814..8978)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4H8W1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP87155.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_12_scaffold_70_9
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9114..10082)
DNA (969bp) protein (323aa)
Divalent heavy-metal cations transporter n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTR9_HALBP
divalent heavy-metal cations transporter
Divalent heavy-metal cations transporter {ECO:0000313|EMBL:ELY24732.1}; Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:ADQ68224.1}; TaxID=469382 species="Archaea; Euryarchaeota;
sw_12_scaffold_70_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10242..11033)
DNA (792bp) protein (264aa)
Iron (Metal) dependent repressor, DtxR family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEL8_9EURY
Iron (Metal) dependent repressor, DtxR family protein {ECO:0000313|EMBL:EMA55509.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
Mn-dependent transcriptional regulator
sw_12_scaffold_70_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11509..11904)
DNA (396bp) protein (132aa)
Universal stress protein uspa-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1M8_9EURY
Universal stress protein uspa-like protein {ECO:0000313|EMBL:EMA51438.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
universal stress protein uspa-like protein
sw_12_scaffold_70_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11906..12340)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR88_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46970.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_70_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12359..12976)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR88_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46970.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_70_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13028..13240)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MMN3_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA45710.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
sw_12_scaffold_70_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13392..14096)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKZ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46018.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_70_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14294..16381)
DNA (2088bp) protein (696aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1227457 species="Archaea
NAD-dependent DNA ligase (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6R1_9EURY
sw_12_scaffold_70_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16693..18615
DNA (1923bp) protein (641aa)
Putative sulfatase n=2 Tax=Halococcus hamelinensis RepID=M0LX12_9EURY
Putative sulfatase {ECO:0000313|EMBL:EMA36894.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
sulfatase
sw_12_scaffold_70_18
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18795..19859
DNA (1065bp) protein (355aa)
adh13; zinc-binding dehydrogenase (EC:1.1.1.1 1.6.5.5)
Zinc-binding dehydrogenase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAI1_9EURY
Zinc-binding dehydrogenase {ECO:0000313|EMBL:EMA17808.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica J
sw_12_scaffold_70_19
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

20106..21125
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXY8_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG03740.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrob
sw_12_scaffold_70_20
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

21211..22011
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1Q8_THERP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM04954.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATC
sw_12_scaffold_70_21
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22141..23727)
DNA (1587bp) protein (529aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS21567.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
amino acid permease-associated protein id=14632188 bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
amino acid permease-associated protein
sw_12_scaffold_70_22
unknown

Not on your lists

23930..24313
DNA (384bp) protein (128aa)

This feature has no annotations

sw_12_scaffold_70_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24395..25624
DNA (1230bp) protein (410aa)
agxT; aminotransferase class V (serine--pyruvate aminotransferase / alanine--glyoxylate aminotransferase) (EC:2.6.1.-)
Aminotransferase class V (Serine--pyruvate aminotransferase / alanine--glyoxylate aminotransferase) n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEI7_9EURY
Aminotransferase class V (Serine--pyruvate aminotransferase / alanine--glyoxylate aminotransferase) {ECO:0000313|EMBL:EMA55090.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobact
sw_12_scaffold_70_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26057..26638)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME63_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42705.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_12_scaffold_70_25
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26742..27386)
DNA (645bp) protein (215aa)
Sugar phosphate permease n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AG97_NATGS
sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:AFZ72948.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (
sw_12_scaffold_70_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27379..27885)
DNA (507bp) protein (169aa)
Sugar transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPA7_9EURY
Sugar transporter {ECO:0000313|EMBL:EMA46300.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
major facilitator superfamily protein
sw_12_scaffold_70_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28021..29385)
DNA (1365bp) protein (455aa)
Dienelactone hydrolase-like enzyme n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVY7_9EURY
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:ELZ26592.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
dienelactone hydrolase-like enzyme
sw_12_scaffold_70_28
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29466..30452)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AHC8_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELY98080.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
sw_12_scaffold_70_29
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30618..31481)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VEP8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY35524.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
sw_12_scaffold_70_30
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31660..32961
DNA (1302bp) protein (434aa)
metY1; O-acetylhomoserine aminocarboxypropyltransferase (methionine synthase) (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase 1, methionine synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAC9_9EURY
O-acetylhomoserine aminocarboxypropyltransferase 1, methionine synthase {ECO:0000313|EMBL:EMA42706.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
Displaying items 1-30 of 69 in total

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