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sw_12_scaffold_79

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_79_1
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..3223
DNA (3222bp) protein (1074aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LP74_HALLT
Uncharacterized protein {ECO:0000313|EMBL:ACM57162.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
hypothetical protein
sw_12_scaffold_79_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3779..6016)
DNA (2238bp) protein (746aa)
PAS/PAC sensor protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N445_9EURY
PAS/PAC sensor protein {ECO:0000313|EMBL:EMA52712.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
GAF/PAS/PAC domain-containing protein
sw_12_scaffold_79_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6811..7062
DNA (252bp) protein (84aa)
PAS/PAC sensor protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N445_9EURY
PAS/PAC sensor protein {ECO:0000313|EMBL:EMA52712.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
sw_12_scaffold_79_4
unknown

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7841..7987
DNA (147bp) protein (49aa)

This feature has no annotations

sw_12_scaffold_79_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8222..9412)
DNA (1191bp) protein (397aa)
phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CU06_9EURY
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:ELZ26735.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
sw_12_scaffold_79_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9567..10991)
DNA (1425bp) protein (475aa)
Periplasmic copper-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3Q1_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EMA39254.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamel
hypothetical protein
sw_12_scaffold_79_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11129..11668
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J649_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15767.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_79_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12026..12601)
DNA (576bp) protein (192aa)
Halocyanin n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M3A3_HALMO
Halocyanin {ECO:0000313|EMBL:EMA39888.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
blue (type 1) copper domain-containing protein
sw_12_scaffold_79_9
unknown

Not on your lists

12846..12980
DNA (135bp) protein (45aa)

This feature has no annotations

sw_12_scaffold_79_10
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13026..13427)
DNA (402bp) protein (134aa)
hypothetical protein id=24651996 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Uncharacterized protein {ECO:0000313|EMBL:ERH11688.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_12_scaffold_79_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14164..14577)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRI8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA35713.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_79_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14725..15246
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CG92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22271.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_79_13
unknown

Not on your lists

comp(15285..15467)
DNA (183bp) protein (61aa)

This feature has no annotations

sw_12_scaffold_79_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15486..15893)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92869.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
CoA-binding domain-containing protein
sw_12_scaffold_79_15
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16028..16654)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HGQ9_9EURY
RecA-superfamily ATPase possibly involved in signal transduction
Uncharacterized protein {ECO:0000313|EMBL:ELZ82264.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
sw_12_scaffold_79_16
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16720..17598)
DNA (879bp) protein (293aa)
Digeranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01286}; Short=DGGGP synthase {ECO:0000256|HAMAP-Rule:MF_01286};; Short=DGGGPS {ECO:0000256|HAMAP-Rule:MF_01286};; EC=2.5.1.42 {EC
Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Natrinema gari JCM 14663 RepID=L9YTX3_9EURY
UbiA prenyltransferase
sw_12_scaffold_79_trna_1
unknown

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17671..17745
DNA (75bp)
transferRNA
sw_12_scaffold_79_17

Not on your lists

comp(18206..19642)
DNA (1437bp) protein (479aa)
Amidase n=1 Tax=halophilic archaeon DL31 RepID=G2MM32_9ARCH
amidase
Amidase {ECO:0000313|EMBL:AEN05859.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_79_18
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19716..20597)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI000376B413
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:ELZ02968.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;"
binding-protein-dependent transport system inner membrane protein
sw_12_scaffold_79_19
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20590..21540)
DNA (951bp) protein (317aa)
Spermidine Putrescine ABC transporter permease component PotB n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YS77_9EURY
Spermidine Putrescine ABC transporter permease component PotB {ECO:0000313|EMBL:GAD51835.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="H
binding-protein-dependent transport system inner membrane protein
sw_12_scaffold_79_20
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21540..22709)
DNA (1170bp) protein (390aa)
Spermidine/putrescine ABC transporter ATPase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZRC0_9EURY
Spermidine/putrescine ABC transporter ATPase {ECO:0000313|EMBL:ELY88102.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba tai
spermidine/putrescine ABC transporter ATPase
sw_12_scaffold_79_21
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22716..23879)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3AAS0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD51833.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
family 1 extracellular solute-binding protein
sw_12_scaffold_79_22
unknown

Not on your lists

23914..24624
DNA (711bp) protein (237aa)

This feature has no annotations

sw_12_scaffold_79_23
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24671..24910
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCK2_HALXS
Uncharacterized protein {ECO:0000313|EMBL:KDE59724.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_12_scaffold_79_24
unknown

Not on your lists

comp(25044..25436)
DNA (393bp) protein (131aa)

This feature has no annotations

sw_12_scaffold_79_25
unknown

Not on your lists

comp(25776..25988)
DNA (213bp) protein (71aa)

This feature has no annotations

sw_12_scaffold_79_26
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26183..26326)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XLJ3_9EURY
transposase
Uncharacterized protein {ECO:0000313|EMBL:ELY62437.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
Displaying 27 items

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