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sw_12_scaffold_836

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_836_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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158..433
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM31_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45794.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_12_scaffold_836_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

388..744
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZ13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50851.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_12_scaffold_836_3
unknown

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comp(821..976)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_12_scaffold_836_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1251..1406
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M258_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39786.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
small CPxCG-related zinc finger protein
sw_12_scaffold_836_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1410..2135
DNA (726bp) protein (242aa)
DNA binding domain-containing protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGW1_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EJN60474.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
DNA binding domain-containing protein
sw_12_scaffold_836_6
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2642..3016
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9ZB23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY82812.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_12_scaffold_836_7
unknown

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comp(3060..3275)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_12_scaffold_836_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3455..4714
DNA (1260bp) protein (420aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY63_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EMA50667.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
Mandelate racemase/muconate lactonizing protein
sw_12_scaffold_836_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4772..5152)
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA41539.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_12_scaffold_836_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5247..6185
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYS2_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01992.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_12_scaffold_836_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6913..8682)
DNA (1770bp) protein (590aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9D2_9EURY
sw_12_scaffold_836_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9101..10537)
DNA (1437bp) protein (479aa)
aldH2; aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde Dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M739_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EMA41218.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
sw_12_scaffold_836_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10770..11888)
DNA (1119bp) protein (373aa)
Transcriptional regulator, TrmB n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQA9_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EFW93173.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
TrmB family transcriptional regulator
sw_12_scaffold_836_14
unknown

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12455..12841
DNA (387bp) protein (129aa)

This feature has no annotations

sw_12_scaffold_836_15
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12838..13854
DNA (1017bp) protein (339aa)
Arylsulfotransferase (ASST) {ECO:0000313|EMBL:ERG94720.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J0
hypothetical protein id=24630946 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
hypothetical protein
sw_12_scaffold_836_16
unknown

Not on your lists

comp(13897..14310)
DNA (414bp) protein (138aa)

This feature has no annotations

sw_12_scaffold_836_17
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14356..14718
DNA (363bp) protein (121aa)
Peptidase M24 n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XR63_9EURY
Peptidase M24 {ECO:0000313|EMBL:ELY63916.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
peptidase M24
sw_12_scaffold_836_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14862..15827)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZU4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50818.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_836_19
Plasmodium vivax, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

comp(15914..16300)
DNA (387bp) protein (129aa)
Calcium-dependent protein kinase 3, putative {ECO:0000313|EMBL:EDL45616.1}; TaxID=126793 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (P
sw_12_scaffold_836_20

Not on your lists

16540..17634
DNA (1095bp) protein (365aa)
celM; cellulase, endo-1,3(4)-beta-glucanase, peptidase M42 family protein / endoglucanase (EC:3.2.1.4)
Cellulase M related protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1QQ89_9EURY
Cellulase M related protein {ECO:0000313|EMBL:ESS08958.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
sw_12_scaffold_836_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17867..18853
DNA (987bp) protein (329aa)
Oxidoreductase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYM7_9EURY
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EMA50418.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
oxidoreductase domain-containing protein
sw_12_scaffold_836_22
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19069..19326
DNA (258bp) protein (86aa)
Like-Sm ribonucleoprotein core n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SRE5_NATMM
Sm ribonucleoprotein-like protein
Sm ribonucleoprotein-like protein {ECO:0000313|EMBL:ELY25306.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain
sw_12_scaffold_836_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19323..19493
DNA (171bp) protein (57aa)
50S ribosomal protein L37e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0L4_NATM8
rpl37e; 50S ribosomal protein L37e
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_12_scaffold_836_24
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19620..21026
DNA (1407bp) protein (469aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NR41_HALBP
Displaying 24 items

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