ggKbase home page

sw_12_scaffold_95

Search features with annotation key words

Displaying items 1-30 of 59 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_95_1
unknown

Not on your lists

comp(3..209)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_12_scaffold_95_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

571..1167
DNA (597bp) protein (199aa)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {E
Isopentenyl-diphosphate Delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Halogranum salarium B-1 RepID=J3EWP3_9EURY
sw_12_scaffold_95_3
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1484..2422
DNA (939bp) protein (313aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937, ECO:0000313|EMBL:ELZ36258.1}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DN54_9EURY
1,4-dihydroxy-2-naphthoate octaprenyltransferase
sw_12_scaffold_95_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2419..3522
DNA (1104bp) protein (368aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
O-succinylbenzoate-CoA synthase (EC:4.2.1.-)
Chloromuconate cycloisomerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N428_9EURY
sw_12_scaffold_95_5
unknown

Not on your lists

comp(3634..4140)
DNA (507bp) protein (169aa)

This feature has no annotations

sw_12_scaffold_95_6
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4474..6132
DNA (1659bp) protein (553aa)
O-succinylbenzoate-CoA ligase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VXC1_9EURY
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:KDE58713.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56
o-succinylbenzoate-CoA ligase
sw_12_scaffold_95_7
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6230..6589
DNA (360bp) protein (120aa)
Transcription repressor CinR n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X9K9_9EURY
Transcription repressor CinR {ECO:0000313|EMBL:ELY58434.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticu
transcription factor
sw_12_scaffold_95_8
unknown

Not on your lists

comp(7033..7398)
DNA (366bp) protein (122aa)

This feature has no annotations

sw_12_scaffold_95_9
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7557..7943)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EVK4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ51831.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_12_scaffold_95_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8033..8704)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MER9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44221.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_95_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8852..9448)
DNA (597bp) protein (199aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYB1_9EURY
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EMA49839.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
ribosomal-protein-alanine acetyltransferase
sw_12_scaffold_95_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9498..10547)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUH4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36823.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_95_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11200..11967)
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Halococcus hamelinensis RepID=M0LTD7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36822.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_95_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12084..13022)
DNA (939bp) protein (313aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA36512.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EMA36512.1};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSK2_9EURY
branched-chain amino acid aminotransferase
sw_12_scaffold_95_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13519..14919)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDC0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55074.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_95_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15571..16539)
DNA (969bp) protein (323aa)
Oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4D8_9EURY
Oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EMA52751.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
aldo/keto reductase
sw_12_scaffold_95_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16595..18319)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBI5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54454.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_12_scaffold_95_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18446..20047
DNA (1602bp) protein (534aa)
Protein synthesis factor GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDL9_9EURY
Protein synthesis factor GTP-binding protein {ECO:0000313|EMBL:EMA43428.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
protein synthesis factor GTP-binding
sw_12_scaffold_95_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20109..20657)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCF0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43426.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_95_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20716..21651)
DNA (936bp) protein (312aa)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; EC=3.5.4.27 {ECO:0000256|HAMAP-Rule:MF_00486};; Methenyl-H4MPT cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; TaxID
methenyltetrahydromethanopterin cyclohydrolase (EC:3.5.4.27)
Methenyltetrahydromethanopterin cyclohydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZW0_9EURY
sw_12_scaffold_95_21
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21752..22408)
DNA (657bp) protein (219aa)
alkA; DNA-3-methyladenine glycosylase (EC:3.2.2.21)
DNA-3-methyladenine glycosylase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J6I8_9EURY
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:EMA04757.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans A
sw_12_scaffold_95_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22469..22783)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M841_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41518.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_95_23
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(23161..23694)
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSN1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFH82994.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
sw_12_scaffold_95_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23898..24806)
DNA (909bp) protein (303aa)
ABC-2 type transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBN2_9EURY
ABC-2 type transporter {ECO:0000313|EMBL:EMA55276.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
ABC-2 type transporter
sw_12_scaffold_95_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24803..25966)
DNA (1164bp) protein (388aa)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF01_9EURY
Daunorubicin resistance ABC transporter ATPase subunit {ECO:0000313|EMBL:EMA55275.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
daunorubicin resistance ABC transporter ATPase subunit
sw_12_scaffold_95_26
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26026..26661
DNA (636bp) protein (212aa)
TetR family transcriptional regulator n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XUR6_9EURY
TetR family transcriptional regulator {ECO:0000313|EMBL:ELY65544.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme
regulatory protein TetR
sw_12_scaffold_95_27
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26775..27059)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYV5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90371.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_12_scaffold_95_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27284..28702
DNA (1419bp) protein (473aa)
Drug resistance transporter, EmrB/QacA subfamily protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW17_9EURY
Drug resistance transporter, EmrB/QacA subfamily protein {ECO:0000313|EMBL:EFW91430.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" s
drug resistance transporter, EmrB/QacA subfamily
sw_12_scaffold_95_29
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28804..29742
DNA (939bp) protein (313aa)
NMT1/THI5 like domain-containing protein; K15598 putative hydroxymethylpyrimidine transport system substrate-binding protein id=24619698 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ERH07111.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
NMT1/THI5 like domain-containing protein
sw_12_scaffold_95_30
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29844..30179
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HBC7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88010.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
Displaying items 1-30 of 59 in total

View Taxonomy