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sw_12_scaffold_99

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_99_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1..330
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHD4_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72652.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
sw_12_scaffold_99_2
unknown

Not on your lists

comp(266..640)
DNA (375bp) protein (125aa)

This feature has no annotations

sw_12_scaffold_99_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(867..1880)
DNA (1014bp) protein (338aa)
Putative mechanosensitive ion channel n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N161_9EURY
Putative mechanosensitive ion channel {ECO:0000313|EMBL:EMA51288.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
mechanosensitive ion channel protein MscS
sw_12_scaffold_99_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1885..2127)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TU36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46809.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_99_5
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2175..2498)
DNA (324bp) protein (108aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
Ribonuclease P protein component 4 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYN5_HALTV
RNAse P, Rpr2/Rpp21 subunit
sw_12_scaffold_99_6
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2806..3846
DNA (1041bp) protein (347aa)
Glycosyl transferase group 1 n=1 Tax=Halobacterium sp. DL1 RepID=G4IGR4_9EURY
Glycosyl transferase family 1 {ECO:0000313|EMBL:AHG03404.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. D
gtr-4; sugar transferase
sw_12_scaffold_99_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4003..5103
DNA (1101bp) protein (367aa)
Glycosyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7Y9_9EURY
Glycosyltransferase {ECO:0000313|EMBL:EMA54037.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
gtr-5; glycosyltransferase
sw_12_scaffold_99_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5177..5830)
DNA (654bp) protein (218aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKF1_9EURY
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:EMA46162.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
AraC family transcriptional regulator
sw_12_scaffold_99_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5985..7427)
DNA (1443bp) protein (481aa)
deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXU4_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:EMA50133.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
sw_12_scaffold_99_10
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7586..8383
DNA (798bp) protein (266aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Natrinema gari JCM 14663 RepID=L9YM81_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ14536.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
short-chain dehydrogenase/reductase SDR
sw_12_scaffold_99_11
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8454..9233)
DNA (780bp) protein (260aa)
Uncharacterized protein, putative amidase n=1 Tax=Natronococcus occultus SP4 RepID=L0K433_9EURY
uncharacterized protein, putative amidase
Uncharacterized protein, putative amidase {ECO:0000313|EMBL:AGB38858.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus
sw_12_scaffold_99_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9369..10859)
DNA (1491bp) protein (497aa)
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRQ9_9EURY
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:EFW92678.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
FAD/FMN-dependent dehydrogenase
sw_12_scaffold_99_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10962..12065)
DNA (1104bp) protein (368aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K5P8_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA16158.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amyl
NAD-dependent epimerase/dehydratase
sw_12_scaffold_99_14
unknown

Not on your lists

12265..12603
DNA (339bp) protein (113aa)

This feature has no annotations

sw_12_scaffold_99_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12688..13545)
DNA (858bp) protein (286aa)
Initiation factor 2B-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEK1_9EURY
Initiation factor 2B-like protein {ECO:0000313|EMBL:EMA44156.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
initiation factor 2B related
sw_12_scaffold_99_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13671..14957
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44683.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
Tat (twin-arginine translocation) pathway signal sequence domain-containing protein
sw_12_scaffold_99_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15054..16319)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1E8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50490.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_99_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16489..18030
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY35_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50491.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_99_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18418..18795
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKS7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45344.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_99_20
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18792..19319
DNA (528bp) protein (176aa)
Transcription regulator n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XC50_9EURY
Transcription regulator {ECO:0000313|EMBL:ELY59315.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
transcriptional regulator
sw_12_scaffold_99_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19484..20710
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ20_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45348.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_99_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20909..21655)
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Halococcus hamelinensis RepID=M0LTD7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA36822.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_12_scaffold_99_23
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22156..23355)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V721_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV44613.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_12_scaffold_99_24
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23553..23801)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V750_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV44639.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_12_scaffold_99_25
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23924..24040
DNA (117bp) protein (39aa)
Transposase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGP1_NATGS
transposase
Transposase {ECO:0000313|EMBL:AFZ72981.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (strain ATCC 4
Displaying 25 items

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