ggKbase home page

sw_12_scaffold_1008

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1008_1
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3..593
DNA (591bp) protein (197aa)
Pre-mRNA processing ribonucleoprotein, binding domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RT89_HALTV
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein
Pre-mRNA processing ribonucleoprotein, binding domain protein {ECO:0000313|EMBL:ADB60969.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" s
sw_12_scaffold_1008_2

Not on your lists


586..1233
DNA (648bp) protein (216aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1412872 species="Archaea; environmental samples.;" source="unc
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RT90_HALTV
fibrillarin
sw_12_scaffold_1008_3
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1433..1756)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BBW8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKF39885.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
sw_12_scaffold_1008_4
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1753..3297)
DNA (1545bp) protein (515aa)
Carboxyl transferase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LVA8_9EURY
acetyl-CoA carboxylase, carboxyl transferase subunit alpha
Carboxyl transferase {ECO:0000313|EMBL:EMA36005.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
sw_12_scaffold_1008_5
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3357..3515)
DNA (159bp) protein (53aa)
Dehydrogenase n=1 Tax=uncultured archaeon A07HN63 RepID=V4YAT9_9ARCH
Dehydrogenase {ECO:0000313|EMBL:ERH00668.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
glucose 1-dehydrogenase
sw_12_scaffold_1008_6
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4103..4756
DNA (654bp) protein (218aa)
Glycerophosphodiester phosphodiesterase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H861_9EURY
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:ELZ80650.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbon
ugpQ; glycerophosphodiester phosphodiesterase
sw_12_scaffold_1008_7
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4741..6705)
DNA (1965bp) protein (655aa)
Membrane-flanked domain protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BX76_9EURY
Membrane-flanked domain protein {ECO:0000313|EMBL:ELZ15631.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermoto
hypothetical protein
sw_12_scaffold_1008_8
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6702..7163)
DNA (462bp) protein (154aa)
Membrane-flanked domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRS6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH97577.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
sw_12_scaffold_1008_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7581..9062)
DNA (1482bp) protein (494aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=485914 species="Archaea; Euryar
Fumarate hydratase class II n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P091_HALMD
fumC; fumarate hydratase
sw_12_scaffold_1008_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9053..10027)
DNA (975bp) protein (325aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5S4_9EURY
flap structure-specific endonuclease
sw_12_scaffold_1008_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10075..10629)
DNA (555bp) protein (185aa)
GNAT family acetyltransferase {ECO:0000313|EMBL:CAI49985.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI49985.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPG6_NATPD
hypothetical protein
Displaying 11 items

View Taxonomy