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sw_12_scaffold_1612

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1612_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..414)
DNA (414bp) protein (138aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMS9_9EURY
DNA topoisomerase vi, b subunit
sw_12_scaffold_1612_2
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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581..2506
DNA (1926bp) protein (642aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1085029 species="Archaea; Eu
DNA gyrase subunit beta (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=halophilic archaeon J07HB67 RepID=U1QXM7_9EURY
sw_12_scaffold_1612_3
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2685..4025)
DNA (1341bp) protein (447aa)
val start codon n=1 Tax=Burkholderia ubonensis RepID=UPI00016A5D77
hypothetical protein
Val start codon {ECO:0000313|EMBL:ABA48200.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkho
sw_12_scaffold_1612_4
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4292..5080
DNA (789bp) protein (263aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopig
DNA gyrase subunit A n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8D4_HALXS
sw_12_scaffold_1612_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5108..6022)
DNA (915bp) protein (305aa)
Arginase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDL9_9EURY
Arginase {ECO:0000313|EMBL:EMA55653.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
arginase
sw_12_scaffold_1612_6
unknown

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comp(6049..6150)
DNA (102bp) protein (34aa)

This feature has no annotations

sw_12_scaffold_1612_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6172..6615)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F0Z8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09734.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_12_scaffold_1612_8
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6715..8865
DNA (2151bp) protein (717aa)
OB-fold tRNA/helicase-type nucleic acid binding protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B177_9EURY
OB-fold tRNA/helicase-type nucleic acid binding protein {ECO:0000313|EMBL:ELZ04312.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Na
RecJ-like exonuclease with DnaJ-type Zn-finger domain
sw_12_scaffold_1612_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9005..9178
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:EFW90323.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_12_scaffold_1612_10
unknown

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9260..9370
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 10 items

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