ggKbase home page

sw_12_scaffold_1661

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1661_1

Not on your lists

3..257
DNA (255bp) protein (85aa)
Putative DNA binding protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PWX1_9EURY
Putative DNA binding protein {ECO:0000313|EMBL:ESS04296.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
HTH-10 family transcription regulator
sw_12_scaffold_1661_2
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(399..1475)
DNA (1077bp) protein (359aa)
brp; bacteriorhodopsin-like protein id=24619440 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Beta-carotene 15,15''-monooxygenase, Brp/Blh family {ECO:0000313|EMBL:ERH06856.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Hal
bacteriorhodopsin-like protein
sw_12_scaffold_1661_3
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1722..2123)
DNA (402bp) protein (134aa)
Phytoene dehydrogenase n=2 Tax=Haloarcula hispanica RepID=G0HXS9_HALHT
crtI2; phytoene dehydrogenase
Phytoene dehydrogenase {ECO:0000313|EMBL:EMA33691.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131
sw_12_scaffold_1661_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2077..3249)
DNA (1173bp) protein (391aa)
crtI_2; phytoene dehydrogenase 2 (phytoene desaturase) (EC:1.14.99.-)
Phytoene dehydrogenase (Phytoene desaturase) {ECO:0000313|EMBL:CAI48193.1}; EC=1.14.99.- {ECO:0000313|EMBL:CAI48193.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Phytoene dehydrogenase (Phytoene desaturase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUI7_NATPD
sw_12_scaffold_1661_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3264..3623)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SJU1_9EURY
Bacterial regulatory protein, arsr family {ECO:0000313|EMBL:EMA42804.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
IclR family transcriptional regulator
sw_12_scaffold_1661_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3978..5063)
DNA (1086bp) protein (362aa)
GMP reductase (EC:1.7.1.7)
GMP reductase {ECO:0000313|EMBL:AEH38438.1}; EC=1.7.1.7 {ECO:0000313|EMBL:AEH38438.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Ha
GMP reductase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCX0_HALXS
sw_12_scaffold_1661_7

Not on your lists

5889..7121
DNA (1233bp) protein (411aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MH70_9ARCH
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:AEN06316.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_1661_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7451..7834
DNA (384bp) protein (128aa)
Peptidase S9 prolyl oligopeptidase active site domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7L0_9EURY
Peptidase S9 prolyl oligopeptidase active site domain-containing protein {ECO:0000313|EMBL:EMA53523.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
peptidase S9 prolyl oligopeptidase active site domain-containing protein
sw_12_scaffold_1661_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7873..8343
DNA (471bp) protein (157aa)
msrB1; peptide methionine sulfoxide reductase (R-form specific) (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] id=24628646 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
msrB1; peptide methionine sulfoxide reductase MsrB (R-form specific) (EC:1.8.4.12)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:ERG91391.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsb
sw_12_scaffold_1661_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8343..8951
DNA (609bp) protein (203aa)
msrA; peptide methionine sulfoxide reductase (S-form specific) id=24634212 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Peptide methionine sulfoxide reductase {ECO:0000313|EMBL:ERG97005.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum
msrA; peptide methionine sulfoxide reductase (S-form specific)
sw_12_scaffold_1661_11
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9037..10317
DNA (1281bp) protein (427aa)
Membrane lipoprotein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PH79_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH97806.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
sw_12_scaffold_1661_12
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10384..11655)
DNA (1272bp) protein (424aa)
Kynureninase {ECO:0000256|PIRNR:PIRNR038800, ECO:0000313|EMBL:EMA27868.1}; EC=3.7.1.3 {ECO:0000256|PIRNR:PIRNR038800};; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
Kynureninase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L458_9EURY
kynureninase
sw_12_scaffold_1661_13

Not on your lists

comp(11704..12045)
DNA (342bp) protein (114aa)
Cupin 2 conserved barrel domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MHA5_9ARCH
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AEN06500.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_12_scaffold_1661_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12359..13159
DNA (801bp) protein (267aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IEM1_9EURY
Alpha/beta hydrolase {ECO:0000313|EMBL:AHG03708.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
esterase/lipase
sw_12_scaffold_1661_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13168..13503)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW89803.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
deacylase
sw_12_scaffold_1661_trna_1
unknown

Not on your lists

comp(13557..13629)
DNA (73bp)
transferRNA
sw_12_scaffold_1661_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13681..14676)
DNA (996bp) protein (332aa)
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHZ5_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
transcription initiation factor IIB 2
sw_12_scaffold_1661_17
unknown

Not on your lists

comp(14835..15014)
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 18 items

View Taxonomy