ggKbase home page

sw_12_scaffold_1693

Search features with annotation key words

Displaying items 1-30 of 47 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1693_1
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1..1116)
DNA (1116bp) protein (372aa)
Protein pelota homolog {ECO:0000255|HAMAP-Rule:MF_01853}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01853};; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Protein pelota homolog n=2 Tax=Haloarcula RepID=PELO_HALMA
pelA; cell division protein pelota
sw_12_scaffold_1693_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1518..3302)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUC6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25479.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
fibronectin-binding A domain-containing protein
sw_12_scaffold_1693_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3392..6160)
DNA (2769bp) protein (923aa)
DNA/RNA helicase, superfamily i n=1 Tax=Halogranum salarium B-1 RepID=J2ZEU7_9EURY
DNA/RNA helicase, superfamily i {ECO:0000313|EMBL:EJN59190.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
DNA replication factor Dna2
sw_12_scaffold_1693_4
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6329..6877
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WTI2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY51638.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
sw_12_scaffold_1693_5
unknown

Not on your lists

comp(6964..8103)
DNA (1140bp) protein (380aa)

This feature has no annotations

sw_12_scaffold_1693_6
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8764..9888
DNA (1125bp) protein (375aa)
Uncharacterized protein (Fragment) n=1 Tax=halophilic archaeon J07HB67 RepID=U1PQC1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH12631.1}; Flags: Fragment;; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_12_scaffold_1693_7
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10093..10839
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W3G8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00522.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_12_scaffold_1693_8
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10878..11693
DNA (816bp) protein (272aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000313|EMBL:ELZ57409.1}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}
pyrF; orotidine 5-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FFL1_9EURY
sw_12_scaffold_1693_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11768..12424
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036641AF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48216.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
sw_12_scaffold_1693_10
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12421..12612)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LIQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA32319.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_12_scaffold_1693_11
unknown

Not on your lists

comp(12850..12975)
DNA (126bp) protein (42aa)

This feature has no annotations

sw_12_scaffold_1693_12
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13151..14647
DNA (1497bp) protein (499aa)
gbp; translation elongation factor aEF-1 alpha subunit-like protein (EC:3.6.5.3)
Translation elongation factor aEF-1 subunit alpha-like protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HDW0_9EURY
Translation elongation factor aEF-1 subunit alpha-like protein {ECO:0000313|EMBL:ELZ81284.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" s
sw_12_scaffold_1693_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14653..15330
DNA (678bp) protein (226aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYM9_9EURY
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:EMA49964.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
haloacid dehalogenase superfamily enzyme, subfamily IA
sw_12_scaffold_1693_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15276..15806)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8W1_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14296.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_12_scaffold_1693_15
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15811..16743)
DNA (933bp) protein (311aa)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000313|EMBL:AKH98276.1}; EC=3.5.4.27 {ECO:0000313|EMBL:AKH98276.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
methenyltetrahydromethanopterin cyclohydrolase (EC:3.5.4.27)
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MQZ4_9EURY
sw_12_scaffold_1693_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16789..17100)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IGM8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04452.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_12_scaffold_1693_17
unknown

Not on your lists

17210..18073
DNA (864bp) protein (288aa)

This feature has no annotations

sw_12_scaffold_1693_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18235..18618)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MUT9_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA49078.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_12_scaffold_1693_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19057..19890
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49140.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_1693_20
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


19953..21002
DNA (1050bp) protein (350aa)
50S ribosomal protein L3 n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ACE6_NATGS
50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; Flags: Precursor;; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; N
sw_12_scaffold_1693_21
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21251..21418
DNA (168bp) protein (56aa)
50S ribosomal protein L4 n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZKY4_9EURY
50S ribosomal protein L4 {ECO:0000313|EMBL:AKH98265.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum s
50S ribosomal protein L4P
sw_12_scaffold_1693_22
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21415..21672
DNA (258bp) protein (86aa)
50S ribosomal protein L23P n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KFX8_HALAR
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentine
archaeal ribosomal protein L23
sw_12_scaffold_1693_23

Not on your lists


21674..22021
DNA (348bp) protein (116aa)
50S ribosomal protein L2P n=1 Tax=Halomicrobium katesii RepID=UPI00036F1B22
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
rpl2p; 50S ribosomal protein L2P
sw_12_scaffold_1693_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22054..22359
DNA (306bp) protein (102aa)
50S ribosomal protein L2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIT3_9EURY
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rpl2p; 50S ribosomal protein L2P
sw_12_scaffold_1693_25

Not on your lists


22356..22781
DNA (426bp) protein (142aa)
ribosomal protein S19/S15 id=24636019 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
rps19; 30S ribosomal protein S19
sw_12_scaffold_1693_26
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22786..23271
DNA (486bp) protein (162aa)
50S ribosomal protein L22P n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MQL2_9EURY
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sou
ribosomal protein L22/L17
sw_12_scaffold_1693_27
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


23264..24337
DNA (1074bp) protein (358aa)
30S ribosomal protein S3 n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W682_9EURY
rps3p; 30S ribosomal protein S3P
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-
sw_12_scaffold_1693_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


24334..24552
DNA (219bp) protein (73aa)
50S ribosomal protein L29P n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CL92_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
50S ribosomal protein L29P
sw_12_scaffold_1693_29
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


24967..25170
DNA (204bp) protein (68aa)
30S ribosomal protein S17 n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TZL2_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:ESP88901.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Hal
rps17p; 30S ribosomal protein S17P
sw_12_scaffold_1693_30
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


25170..25568
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL14_NATPD
rpl14p; 50S ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
Displaying items 1-30 of 47 in total

View Taxonomy