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sw_12_scaffold_2603

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_2603_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..1641
DNA (1641bp) protein (547aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LA99_HALJP
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA30487.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
peptide ABC transporter substrate-binding protein
sw_12_scaffold_2603_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1693..2676
DNA (984bp) protein (328aa)
ABC transporter permease n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBK3_HALJP
ABC transporter permease {ECO:0000313|EMBL:EMA30488.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 61
ABC transporter permease
sw_12_scaffold_2603_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2678..3868
DNA (1191bp) protein (397aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQE8_HALBP
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADQ67821.1}; Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ELY23497.1}; TaxID=4
sw_12_scaffold_2603_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3871..4815
DNA (945bp) protein (315aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZP6_9EURY
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA38643.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
peptide ABC transporter ATPase
sw_12_scaffold_2603_5
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4808..6175
DNA (1368bp) protein (456aa)
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HPN5_9EURY
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ85677.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;
peptide ABC transporter ATPase
sw_12_scaffold_2603_trna_1
unknown

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comp(6319..6393)
DNA (75bp)
transferRNA
sw_12_scaffold_2603_6
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6513..7079
DNA (567bp) protein (189aa)
Cupin n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BS10_9EURY
Cupin {ECO:0000313|EMBL:ELZ13791.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
cupin domain-containing protein
sw_12_scaffold_2603_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7087..7371)
DNA (285bp) protein (95aa)
hypothetical protein id=24647408 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative membrane protein {ECO:0000313|EMBL:ERH08557.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_12_scaffold_2603_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7447..8220)
DNA (774bp) protein (258aa)
Family 2 glycosyl transferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXJ5_9EURY
Family 2 glycosyl transferase {ECO:0000313|EMBL:ELZ27162.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pall
glycosyltransferase
sw_12_scaffold_2603_9
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8373..10997
DNA (2625bp) protein (875aa)
Uncharacterized protein n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0I6L0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ92426.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717
hypothetical protein
sw_12_scaffold_2603_10
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10835..11209)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8V1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00954.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_12_scaffold_2603_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11211..11489
DNA (279bp) protein (93aa)
50S ribosomal protein L44e n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYC8_HALVA
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismort
rpl44e; 50S ribosomal protein L44e
sw_12_scaffold_2603_12
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11489..11668
DNA (180bp) protein (60aa)
30S ribosomal protein S27e n=2 Tax=Halobacterium salinarum RepID=RS27_HALS3
rps27e; 30S ribosomal protein S27e
30S ribosomal protein S27e; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (strain ATCC 700922 / JCM 110
sw_12_scaffold_2603_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11814..12620
DNA (807bp) protein (269aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISI6_NATPD
tif2a; translation initiation factor IF-2 subunit alpha
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=348780 species="Arch
sw_12_scaffold_2603_14
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12645..12827
DNA (183bp) protein (61aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KK33_9EURY
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula cal
nop10P; H/ACA RNA-protein complex component Nop10p
sw_12_scaffold_2603_15
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12832..13590
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8W0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00979.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
Displaying 16 items

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