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sw_12_scaffold_294

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_294_1
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..1299)
DNA (1299bp) protein (433aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00016154}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00088701};; Glutamyl-tRNA synthetase {ECO:00
Glutamate--tRNA ligase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R853_HALMT
sw_12_scaffold_294_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1509..2342
DNA (834bp) protein (278aa)
RNA methyltransferase, trmh family, group 1 n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DLM6_9EURY
RNA methyltransferase, trmh family, group 1 {ECO:0000313|EMBL:ESP88241.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" sourc
hypothetical protein
sw_12_scaffold_294_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2383..2628
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGG4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ04613.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_12_scaffold_294_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2625..3020
DNA (396bp) protein (132aa)
PilT protein domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDN5_9EURY
PilT protein domain protein {ECO:0000313|EMBL:ELZ19974.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
PilT domain protein
sw_12_scaffold_294_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3048..3314)
DNA (267bp) protein (89aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; TaxID=133352
Glutamyl-tRNA(Gln) amidotransferase subunit E n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9B2_9EURY
glutamyl-tRNA(Gln) amidotransferase subunit E
sw_12_scaffold_294_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4823..5908)
DNA (1086bp) protein (362aa)
Glycerol-1-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LWC6_9EURY
Glycerol-1-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00497, ECO:0000256|SAAS:SAAS00015263}; Short=G1P dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00497};; Short=G1PDH {ECO:0000256|HAMA
3-dehydroquinate synthase
sw_12_scaffold_294_7
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6125..7333
DNA (1209bp) protein (403aa)
Branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QTJ1_9BURK
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETF02658.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.
ABC transporter substrate-binding protein
sw_12_scaffold_294_8
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

7343..8260
DNA (918bp) protein (306aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46V16_CUPPJ
inner-membrane translocator
Tax=BJP_IG2158_Anaerolineales_38_74
sw_12_scaffold_294_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8257..9336
DNA (1080bp) protein (360aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NZ35_AZOS1
livH; branched-chain amino acid transport system permease protein
Branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:BAI73664.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azo
sw_12_scaffold_294_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

9333..10088
DNA (756bp) protein (252aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC-type branched-chain amino acid transport systems, ATPase component id=24647033 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
ABC-type branched-chain amino acid transport systems, ATPase component
sw_12_scaffold_294_11
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10098..10823
DNA (726bp) protein (242aa)
ABC transporter n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0P1V9_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ35906.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
ABC-type branched-chain amino acid transport systems, ATPase component
sw_12_scaffold_294_12
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10825..11829)
DNA (1005bp) protein (335aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCE6_HALXS
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEH38406.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (
sw_12_scaffold_294_13
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12084..13544)
DNA (1461bp) protein (487aa)
prolyl-tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1333523 species="Archaea; Euryar
Proline--tRNA ligase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W022_9EURY
sw_12_scaffold_294_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13896..15821
DNA (1926bp) protein (642aa)
KH-domain/beta-lactamase-domain-containing protein; K07041 id=24614530 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
KH-domain/beta-lactamase-domain-containing protein {ECO:0000313|EMBL:ESP89042.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;
beta-lactamase domain protein
sw_12_scaffold_294_15
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15871..16707)
DNA (837bp) protein (279aa)
HhH-GPD family protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XRM0_9EURY
HhH-GPD family protein {ECO:0000313|EMBL:ELY64420.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
putative endoIII-related endonuclease
sw_12_scaffold_294_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16966..17343)
DNA (378bp) protein (126aa)
DUF371 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XST3_NATM8
DUF371 family protein
DUF371 family protein {ECO:0000313|EMBL:CCQ37453.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
Displaying 16 items

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