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sw_12_scaffold_3143

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_3143_1
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(124..972)
DNA (849bp) protein (283aa)
Bacteriorhodopsin n=1 Tax=halophilic archaeon J07HB67 RepID=U1PN30_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:ERH11544.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hop; halorhodopsin precursor
sw_12_scaffold_3143_2
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1120..1482)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NU68_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA61316.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
sw_12_scaffold_3143_3
unknown

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comp(1553..2395)
DNA (843bp) protein (281aa)

This feature has no annotations

sw_12_scaffold_3143_4
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2530..3660
DNA (1131bp) protein (377aa)
ABC-type transport system, substrate-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EI58_9EURY
ABC-type transport system, substrate-binding protein {ECO:0000313|EMBL:ELZ46763.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
ABC transporter
sw_12_scaffold_3143_5
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3725..5020
DNA (1296bp) protein (432aa)
rbsA1; ribose ABC transporter ATP-binding protein RbsA (EC:3.6.3.17)
Monosaccharide-transporting ATPase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X8V0_9EURY
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ELY58184.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylo
sw_12_scaffold_3143_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4960..5208
DNA (249bp) protein (83aa)
rbsA; ribose ABC transporter ATP-binding protein (EC:3.6.3.17)
Nucleoside ABC transporter ATP-binding protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HES5_9EURY
Nucleoside ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESP88608.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" so
sw_12_scaffold_3143_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6529..7623
DNA (1095bp) protein (365aa)
Ribose ABC transporter permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CS35_9EURY
Ribose ABC transporter permease {ECO:0000313|EMBL:ELZ26065.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pa
rbsC2; ABC-type ribose transport system, permease
sw_12_scaffold_3143_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7672..9456)
DNA (1785bp) protein (595aa)
Xenobiotic-transporting ATPase n=1 Tax=Halobacterium sp. DL1 RepID=G4IG21_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHG04539.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium
ABC transporter ATP-binding protein
sw_12_scaffold_3143_9
unknown

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9680..9814
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 9 items

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