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sw_12_scaffold_4080

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Displaying 7 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_4080_1
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..441)
DNA (441bp) protein (147aa)
Regulatory protein ArsR n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VXR6_9EURY
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AHG00244.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola l
sw_12_scaffold_4080_2
unknown

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656..1324
DNA (669bp) protein (223aa)

This feature has no annotations

sw_12_scaffold_4080_3
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1564..3330
DNA (1767bp) protein (589aa)
valS; valyl-tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=1333523 species="Archaea; Euryarcha
Valine--tRNA ligase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WAD1_9EURY
sw_12_scaffold_4080_4
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3288..4295
DNA (1008bp) protein (336aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005, ECO:0000313|EMBL:EMA37539.1};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=358396
Valine--tRNA ligase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LYY0_9EURY
Suspect SCG annotation. See neighboring gene [sw_12_scaffold_4080_3].
valyl-tRNA synthetase
sw_12_scaffold_4080_5
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4308..4697)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:AFK18770.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_12_scaffold_4080_6
unknown

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comp(4701..5585)
DNA (885bp) protein (295aa)

This feature has no annotations

sw_12_scaffold_4080_7
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5639..6259)
DNA (621bp) protein (207aa)
hypothetical protein id=24650550 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Putative membrane protein {ECO:0000313|EMBL:ERH12174.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
Displaying 7 items

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