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sw_12_scaffold_3173_4

Organism: SW_12_Halobacteria_71_31

near complete RP 29 / 55 MC: 5 BSCG 22 / 51 MC: 1 ASCG 31 / 38 MC: 2
Location: comp(1733..1930)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor Spt4 n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WAC6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 65.0
  • Bit_score: 106
  • Evalue 8.30e-21
DNA-directed RNA polymerase subunit E similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 65.0
  • Bit_score: 106
  • Evalue 2.30e-21
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 65.0
  • Bit_score: 106
  • Evalue 1.10e-20

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Taxonomy

Salinarchaeum sp. Harcht-Bsk1 → Salinarchaeum → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 198
ATGGCGGGTGACCGACTCGCCTGCCGGGAGTGTCACTTCGTCGTCGAGCCGAACGCCGAGACCTGCCCCAGCTGTGGCTCCTCCTCGCTCACCGAGGACTGGGCCGGCTACGTCTGGGTCGCTCACCCCATCGAGAGCGCCATCGCGGAGGAGATGGAAGTCACCGACCCCGGCAAGTACGCGCTGAAGGTGCGATGA
PROTEIN sequence
Length: 66
MAGDRLACRECHFVVEPNAETCPSCGSSSLTEDWAGYVWVAHPIESAIAEEMEVTDPGKYALKVR*