ggKbase home page

sw_12_scaffold_3173_5

Organism: SW_12_Halobacteria_71_31

near complete RP 29 / 55 MC: 5 BSCG 22 / 51 MC: 1 ASCG 31 / 38 MC: 2
Location: comp(1930..2508)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ELZ22092.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ22092.1};; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 188.0
  • Bit_score: 331
  • Evalue 8.50e-88
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 190.0
  • Bit_score: 326
  • Evalue 7.20e-87
DNA-directed RNA polymerase subunit E n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CIA7_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 188.0
  • Bit_score: 331
  • Evalue 6.10e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haloterrigena limicola → Haloterrigena → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 579
ATGTACAAGCGCGTGAGACTGAAGGACACCGTGGAGGTACCGCCGCGGGAGCTGGCCGACGTGGACGAGGGACTCGTCAAGCGGCTGCTTCAGGAGAAGCTCGAAGGCCGCATGGACGAGGAGGTCGGCAGCGTCGTCAGCGTCGTCGACGTCCACGACGTCGGCGAGGGCGCCGTCCTCCCGAACCGGCCGGGCGTCTACTACGAGGCCGAGTTCGACGCCGTCACCTTCGACCCGCAGATGCAGGAGGTCGTCGACGGCACCGTCGTCGAGGTGGTCGACTTCGGCGCCTTCGTCGGCATCGGCCCCGTCGACGGGCTGTTACACGTCTCGCAGATCTCCGACGAGTACCTCGCCTTCGACGGCGAGAACCAGATGCTCGCCTCGCGGGACACGAACCGCACGCTCGCCGTCGAGGACGGAGTGCGGGCGCGCATCGTCACGAAGAGCATCGACGAGCGCAACCCGCGGGACTCGAAGATCGGGCTGACGGCGAAGCAGCCGGGGCTGGGCAAGCACGGCTGGCTCCAGGAGGACCGCGAGCAGCGCGCCGCCGAGGCCGGCGCAGAGGTCGACTGA
PROTEIN sequence
Length: 193
MYKRVRLKDTVEVPPRELADVDEGLVKRLLQEKLEGRMDEEVGSVVSVVDVHDVGEGAVLPNRPGVYYEAEFDAVTFDPQMQEVVDGTVVEVVDFGAFVGIGPVDGLLHVSQISDEYLAFDGENQMLASRDTNRTLAVEDGVRARIVTKSIDERNPRDSKIGLTAKQPGLGKHGWLQEDREQRAAEAGAEVD*