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sw_12_scaffold_3173_6

Organism: SW_12_Halobacteria_71_31

near complete RP 29 / 55 MC: 5 BSCG 22 / 51 MC: 1 ASCG 31 / 38 MC: 2
Location: comp(2510..2962)

Top 3 Functional Annotations

Value Algorithm Source
nucleotide binding protein PINc n=1 Tax=Halorubrum sp. T3 RepID=UPI00037DEC13 similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 149.0
  • Bit_score: 142
  • Evalue 3.10e-31
Vapc superfamily-like protein {ECO:0000313|EMBL:ELZ46723.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 151.0
  • Bit_score: 139
  • Evalue 3.70e-30
PilT N-term./Vapc superfamily-like protein similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 150.0
  • Bit_score: 133
  • Evalue 7.00e-29

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Taxonomy

Halorubrum californiense → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 453
ATGACGCCCCCGGACGGCGAGTCGGACGCGCTCGTCGACCGGACCGACGGGGAGTCGAGCGAGGAGCGAGCGGGGCCGGTCGTCGCGCTCGACACGAGCGCGCTGATGGCGCCCGTCGAGCACGACGTGTGGCTGTTCGAGGAGCTCGACCGGCTCCTGCCCGGCGCCCGGCTCGTGGTGCCCGAGAGCGTCGTCGCGGAGCTGTCGTCGCTGGCCGCCGAGGGGAGCGGCGAGGCGGCCACCGCGGCGAACGTCGGCCGCGACCTCGCGACGCGGGCGACGCGGGTCGAGGCCGAGCCGGGGTACGCCGACGACGCGCTCGTGTCGCTGGCGGCCGCCGGACGGGCCGACTACGTGGCGACGGTCGACGCCGAACTGCGGCGGCGGCTGCACGAGCGGGACGTTCCGACAATATGTTTAAGGGGGGAACGCAAACTGGCGGTCACTCGATGA
PROTEIN sequence
Length: 151
MTPPDGESDALVDRTDGESSEERAGPVVALDTSALMAPVEHDVWLFEELDRLLPGARLVVPESVVAELSSLAAEGSGEAATAANVGRDLATRATRVEAEPGYADDALVSLAAAGRADYVATVDAELRRRLHERDVPTICLRGERKLAVTR*