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sw_12_scaffold_112

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_112_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..1024
DNA (1023bp) protein (341aa)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB0_SALRM
pckA; phosphoenolpyruvate carboxykinase
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
sw_12_scaffold_112_trna_1
unknown

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comp(1294..1366)
DNA (73bp)
transferRNA
sw_12_scaffold_112_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1437..1958)
DNA (522bp) protein (174aa)
hypothetical protein
hypothetical protein id=24659795 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24966.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_112_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2256..3038)
DNA (783bp) protein (261aa)
asd; aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] id=24659796 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ABC46049.1}; EC=1.2.1.11 {ECO:0000313|EMBL:ABC46049.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
asd; aspartate-semialdehyde dehydrogenase
sw_12_scaffold_112_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3286..3921
DNA (636bp) protein (212aa)
FolD bifunctional protein; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=24659797 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includ
FolD bifunctional protein
sw_12_scaffold_112_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4175..5203
DNA (1029bp) protein (343aa)
Transporter, small conductance mechanosensitive ion channel (MscS) family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB4_SALRM
transporter, small conductance mechanosensitive ion channel (MscS) family
Transporter, small conductance mechanosensitive ion channel (MscS) family {ECO:0000313|EMBL:CBH24969.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
sw_12_scaffold_112_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5405..5824)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1H8_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45563.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_112_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6141..6962)
DNA (822bp) protein (274aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=761659 spec
5'-nucleotidase SurE n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB6_SALRM
surE; 5'-nucleotidase surE
sw_12_scaffold_112_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7050..7748)
DNA (699bp) protein (233aa)
Tat pathway signal sequence domain-containing protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH69_RHOM4
Tat pathway signal sequence domain-containing protein
Tat pathway signal sequence domain-containing protein {ECO:0000313|EMBL:ACY49658.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
sw_12_scaffold_112_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7771..9570)
DNA (1800bp) protein (600aa)
Choline dehydrogenase {ECO:0000313|EMBL:CBH25669.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CBH25669.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Choline dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCB4_SALRM
beta; choline dehydrogenase
sw_12_scaffold_112_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10077..10910)
DNA (834bp) protein (278aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB7_SALRM
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
sw_12_scaffold_112_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11006..11605)
DNA (600bp) protein (200aa)
outer membrane lipoprotein
outer membrane lipoprotein id=24659802 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Outer membrane protein (OmpH-like) {ECO:0000313|EMBL:ABC44759.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_12_scaffold_112_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11683..12315)
DNA (633bp) protein (211aa)
Outer membrane protein OmpH, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1H4_SALRD
outer membrane protein OmpH
Outer membrane protein OmpH, putative {ECO:0000313|EMBL:ABC44454.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
sw_12_scaffold_112_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12356..14893)
DNA (2538bp) protein (846aa)
Surface antigen (D15): Surface antigen variable number n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC0_SALRM
Surface antigen (D15): Surface antigen variable number {ECO:0000313|EMBL:CBH24975.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
Surface antigen
sw_12_scaffold_112_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15129..15953)
DNA (825bp) protein (275aa)
uppS; undecaprenyl diphosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] id=24659805 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
uppS; undecaprenyl diphosphate synthase
sw_12_scaffold_112_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16173..17615)
DNA (1443bp) protein (481aa)
Membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=24659806 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
membrane-associated zinc metalloprotease
sw_12_scaffold_112_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17693..18895)
DNA (1203bp) protein (401aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC3_SALRM
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
sw_12_scaffold_112_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19050..20933
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24979.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_112_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20983..22263
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24980.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_112_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22324..22833
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24982.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_112_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22876..23784
DNA (909bp) protein (303aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CBH24983.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBH24983.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
dTDP-4-dehydrorhamnose reductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC8_SALRM
rfbD; dTDP-4-dehydrorhamnose reductase
sw_12_scaffold_112_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23990..25267
DNA (1278bp) protein (426aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176, ECO:0000313|EMBL:CBH24984.1};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(
Serine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC9_SALRM
serS; seryl-tRNA synthetase
sw_12_scaffold_112_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25377..26564)
DNA (1188bp) protein (396aa)
Fructose-1,6-bisphosphatase class 1 2 {ECO:0000255|HAMAP-Rule:MF_01855}; Short=FBPase class 1 2 {ECO:0000255|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000255|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisph
Fructose-1,6-bisphosphatase class 1 2 n=2 Tax=Salinibacter ruber RepID=F16A2_SALRD
fbp; fructose-1,6-bisphosphatase
Displaying 23 items

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