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sw_12_scaffold_171

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_171_1
unknown

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1..183
DNA (183bp) protein (61aa)

This feature has no annotations

sw_12_scaffold_171_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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524..1000
DNA (477bp) protein (159aa)
hypothetical protein
hypothetical protein id=24658505 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25698.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_171_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1557..3224
DNA (1668bp) protein (556aa)
transporter n=1 Tax=Salisaeta longa RepID=UPI0003B6F84C
Formate/nitrite transporter {ECO:0000313|EMBL:EMA50882.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
formate/nitrite transporter
sw_12_scaffold_171_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3525..5561
DNA (2037bp) protein (679aa)
dnaX; DNA polymerase III subunit tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] id=24658504 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA polymerase III subunit tau {ECO:0000313|EMBL:CBH25697.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH25697.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
dnaX; DNA polymerase III subunit tau
sw_12_scaffold_171_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5820..6146
DNA (327bp) protein (109aa)
Nucleoid-associated protein SRU_2556 n=2 Tax=Salinibacter ruber RepID=Q2RZH7_SALRD
hypothetical protein
Nucleoid-associated protein SRU_2556 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_12_scaffold_171_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6229..6945
DNA (717bp) protein (239aa)
Recombination protein RecR n=2 Tax=Salinibacter ruber RepID=RECR_SALRD
recR; recombination protein RecR
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_12_scaffold_171_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7039..8211
DNA (1173bp) protein (391aa)
Saccharopine dehydrogenase {ECO:0000313|EMBL:CBH25694.1}; EC=1.5.1.10 {ECO:0000313|EMBL:CBH25694.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
LYS9; saccharopine dehydrogenase
LYS9; saccharopine dehydrogenase id=24658501 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_12_scaffold_171_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8621..16393
DNA (7773bp) protein (2591aa)
hypothetical protein id=24658500 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46200.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein
sw_12_scaffold_171_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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16521..17255
DNA (735bp) protein (245aa)
lipB; Lipoyltransferase; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] id=24658499 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
lipB; Lipoyltransferase
sw_12_scaffold_171_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(17291..17536)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZI2_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45395.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_171_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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17800..18159
DNA (360bp) protein (120aa)
hypothetical protein
hypothetical protein id=24658497 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43605.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_171_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(18200..18433)
DNA (234bp) protein (78aa)
hypothetical protein
hypothetical protein id=24658496 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25687.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_171_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(18525..18992)
DNA (468bp) protein (156aa)
Ribosomal silencing factor RsfS n=2 Tax=Salinibacter ruber RepID=D5HCD1_SALRM
hypothetical protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_12_scaffold_171_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(19050..19517)
DNA (468bp) protein (156aa)
hypothetical protein
hypothetical protein id=24658494 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25684.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_171_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19619..20128)
DNA (510bp) protein (170aa)
hypothetical protein
hypothetical protein id=24658493 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45787.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_171_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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20453..21457
DNA (1005bp) protein (335aa)
gcp; O-sialoglycoprotein endopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] id=24658492 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01445}; EC=2.3.1.234 {ECO:0000255|HAMAP-Rule:MF_01445};; N6-L-threonylcarbamoyladenine synthase {ECO:0000255|HAMAP-Rule:MF_014
gcp; O-sialoglycoprotein endopeptidase
sw_12_scaffold_171_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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21859..22521
DNA (663bp) protein (221aa)
Uncharacterized BCR, YceG family COG1559 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZI9_SALRD
hypothetical protein
Uncharacterized BCR, YceG family COG1559 {ECO:0000313|EMBL:ABC46170.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_12_scaffold_171_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(22540..23427)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6272F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN74166.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
Displaying 18 items

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