ggKbase home page

sw_12_scaffold_190

Search features with annotation key words

Displaying items 1-30 of 36 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_190_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..721
DNA (720bp) protein (240aa)
Carbon-nitrogen hydrolase n=2 Tax=Salinibacter ruber RepID=D5HAK4_SALRM
carbon-nitrogen hydrolase
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:ABC44951.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
sw_12_scaffold_190_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(834..1334)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HAK5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44156.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_190_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1427..1654
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAK6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25061.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_190_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1775..2338
DNA (564bp) protein (188aa)
FxsA cytoplasmic membrane protein
FxsA cytoplasmic membrane protein; K07113 UPF0716 protein FxsA id=24659763 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
FxsA cytoplasmic membrane protein {ECO:0000313|EMBL:ABC43960.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
sw_12_scaffold_190_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2404..3384)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA81_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24936.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_190_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3470..3889
DNA (420bp) protein (140aa)
hypothetical protein
hypothetical protein id=24659765 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24937.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_190_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4069..5469
DNA (1401bp) protein (467aa)
Xaa-Pro aminopeptidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA83_SALRM
pepP; Xaa-Pro aminopeptidase
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CBH24938.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_12_scaffold_190_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5611..6966
DNA (1356bp) protein (452aa)
Amino acid permease family protein n=2 Tax=Salinibacter ruber RepID=D5HBQ4_SALRM
lysP; amino acid permease
Amino acid permease family protein {ECO:0000313|EMBL:CBH25459.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_12_scaffold_190_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7036..9765)
DNA (2730bp) protein (910aa)
Ferric enterobactin receptor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBQ5_SALRM
bfeA; ferric enterobactin receptor
Ferric enterobactin receptor {ECO:0000313|EMBL:CBH25460.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_190_trna_1
unknown

Not on your lists

comp(10936..11021)
DNA (86bp)
transferRNA
sw_12_scaffold_190_10
Salinibacter_ruber, Salinibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11120..11464)
DNA (345bp) protein (115aa)
id=24659354 bin=Salinibacter_ruber tax=Salinibacter_ruber
id=24659354 bin=Salinibacter_ruber tax=Salinibacter_ruber
sw_12_scaffold_190_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11846..12655
DNA (810bp) protein (270aa)
Cytidine and deoxycytidylate deaminase zinc-binding region domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2Q4_SALRD
cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein
Cytidine and deoxycytidylate deaminase zinc-binding region domain protein {ECO:0000313|EMBL:ABC44518.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
sw_12_scaffold_190_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12862..13815
DNA (954bp) protein (318aa)
Putative transmembrane K+ dependent Na+/Ca+ exchanger-related n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H912_SALRM
transmembrane K+ dependent Na+/Ca+ exchanger-related
Putative transmembrane K+ dependent Na+/Ca+ exchanger-related {ECO:0000313|EMBL:CBH24517.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
sw_12_scaffold_190_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14639..15637
DNA (999bp) protein (333aa)
hemF; Coproporphyrinogen III oxidase, aerobic; K00228 coproporphyrinogen III oxidase [EC:1.3.3.3] id=24656770 bin=Salinibacter_J07SB67 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_J07SB67
subtilisin-like serine proteases
Subtilisin-like serine proteases {ECO:0000313|EMBL:ABC45071.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_12_scaffold_190_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15824..17989
DNA (2166bp) protein (722aa)
hypothetical protein id=24659350 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45699.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein
sw_12_scaffold_190_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18270..19445
DNA (1176bp) protein (392aa)
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:CBH24514.1}; EC=3.5.1.14 {ECO:0000313|EMBL:CBH24514.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
N-acyl-L-amino acid amidohydrolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H909_SALRM
amaA; N-acyl-L-amino acid amidohydrolase
sw_12_scaffold_190_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19534..21258
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H908_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24513.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_190_17
unknown

Not on your lists

comp(21348..21800)
DNA (453bp) protein (151aa)

This feature has no annotations

sw_12_scaffold_190_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21861..22334
DNA (474bp) protein (158aa)
hypothetical protein
hypothetical protein id=24657008 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44568.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_190_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22459..22698)
DNA (240bp) protein (80aa)
Fibronectin, type III n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4F2_SALRM
Fibronectin, type III
Fibronectin, type III {ECO:0000313|EMBL:CBH22792.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_12_scaffold_190_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22863..23072
DNA (210bp) protein (70aa)
Iron-sulfur cluster assembly accessory protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2Y9_SALRD
hesB; iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein, putative {ECO:0000313|EMBL:CBH24432.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
sw_12_scaffold_190_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23388..26021
DNA (2634bp) protein (878aa)
ATP-dependent Clp protease, ATPase subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8S6_SALRM
ATP-dependent Clp protease, ATPase subunit {ECO:0000313|EMBL:CBH24431.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
clpC; ATP-dependent Clp protease, ATPase subunit
sw_12_scaffold_190_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26141..26827)
DNA (687bp) protein (229aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H8S5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45773.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_190_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27045..27962)
DNA (918bp) protein (306aa)
universal stress protein
universal stress protein id=24659263 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Universal stress protein family {ECO:0000313|EMBL:ABC45064.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_12_scaffold_190_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28133..29962)
DNA (1830bp) protein (610aa)
Oligoendopeptidase F n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2Z5_SALRD
Oligoendopeptidase F {ECO:0000313|EMBL:ABC44446.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
pepF; oligoendopeptidase F
sw_12_scaffold_190_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30151..30510
DNA (360bp) protein (120aa)
General stress protein n=2 Tax=Salinibacter ruber RepID=D5H8S0_SALRM
general stress protein
General stress protein {ECO:0000313|EMBL:CBH24425.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_12_scaffold_190_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30525..31109
DNA (585bp) protein (195aa)
Thioredoxin n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8R9_SALRM
trxA; thioredoxin
Thioredoxin {ECO:0000313|EMBL:CBH24424.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
sw_12_scaffold_190_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31121..31501)
DNA (381bp) protein (127aa)
hypothetical protein
hypothetical protein id=24659257 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24423.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_190_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31663..32319
DNA (657bp) protein (219aa)
secreted protein id=24659256 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
secreted protein
Secreted protein {ECO:0000313|EMBL:CBH24422.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
sw_12_scaffold_190_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32280..32762)
DNA (483bp) protein (161aa)
hypothetical protein
hypothetical protein id=24659255 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45190.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 36 in total

View Taxonomy