ggKbase home page

sw_12_scaffold_199

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_199_1
unknown

Not on your lists

1..171
DNA (171bp) protein (57aa)

This feature has no annotations

sw_12_scaffold_199_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

422..967
DNA (546bp) protein (182aa)
Carbonic anhydrase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S214_SALRD
paaY; carbonic anhydrase
Carbonic anhydrase {ECO:0000313|EMBL:ABC44856.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_12_scaffold_199_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1008..1376)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9R3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24768.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_199_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1434..2882)
DNA (1449bp) protein (483aa)
hslU; ATP-dependent protease ATP-binding subunit HslU
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU id=24659603 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=309807 species="Bacteria; Bacteroid
sw_12_scaffold_199_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2952..4049)
DNA (1098bp) protein (366aa)
hypothetical protein
hypothetical protein id=24659602 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24766.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_199_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4149..4712)
DNA (564bp) protein (188aa)
hslV; ATP-dependent protease hslV; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] id=24659601 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=761659 specie
hslV; ATP-dependent protease hslV
sw_12_scaffold_199_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4864..5685)
DNA (822bp) protein (274aa)
mreC; Rod shape-determining protein MreC
mreC; Rod shape-determining protein MreC; K03570 rod shape-determining protein MreC id=24659600 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
sw_12_scaffold_199_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5746..6753)
DNA (1008bp) protein (336aa)
Cell shape determining protein, MreB/Mrl family n=2 Tax=Salinibacter ruber RepID=D5H9Q8_SALRM
mreB; MreB/Mrl family cell shape determining protein
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:CBH24763.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" s
sw_12_scaffold_199_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7108..8694)
DNA (1587bp) protein (529aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q7_SALRM
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
sw_12_scaffold_199_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8841..9497)
DNA (657bp) protein (219aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:CBH24761.1}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:CBH24761.1};; 5'-phosphoribosy
Phosphoribosylglycinamide formyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q6_SALRM
purN; phosphoribosylglycinamide formyltransferase
sw_12_scaffold_199_11
unknown

Not on your lists

10322..10534
DNA (213bp) protein (71aa)

This feature has no annotations

sw_12_scaffold_199_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10756..10974
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J5R3_NOSP7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
sw_12_scaffold_199_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10971..11240
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Hippea alviniae RepID=UPI0003B39760
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
sw_12_scaffold_199_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11276..11956)
DNA (681bp) protein (227aa)
Phosphoglycolate phosphatase {ECO:0000313|EMBL:CBH24758.1}; EC=3.1.3.18 {ECO:0000313|EMBL:CBH24758.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
Phosphoglycolate phosphatase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q3_SALRM
gph; phosphoglycolate phosphatase
sw_12_scaffold_199_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12255..15038
DNA (2784bp) protein (928aa)
DNA polymerase I {ECO:0000313|EMBL:CBH24757.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH24757.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
DNA polymerase I n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q2_SALRM
polA; DNA polymerase I
sw_12_scaffold_199_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15159..16475
DNA (1317bp) protein (439aa)
zinc protease; K07263 zinc protease [EC:3.4.24.-] id=24659593 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Zinc protease {ECO:0000313|EMBL:CBH24755.1}; EC=3.4.99.- {ECO:0000313|EMBL:CBH24755.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
protease
sw_12_scaffold_199_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16675..16953
DNA (279bp) protein (93aa)
IS1 family transposase insA n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4W0_SALRD
IS1 family transposase insA
IS1 family transposase insA {ECO:0000313|EMBL:ABC44196.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_199_18
unknown

Not on your lists

comp(17450..17641)
DNA (192bp) protein (64aa)

This feature has no annotations

sw_12_scaffold_199_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17711..17872)
DNA (162bp) protein (54aa)
purB; adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=24651894 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CBH23383.1}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CBH23383.1}
purB; adenylosuccinate lyase
Displaying 19 items

View Taxonomy