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sw_12_scaffold_223

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_223_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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301..2625
DNA (2325bp) protein (775aa)
Pyridine nucleotide-disulphide oxidoreductase domain protein n=2 Tax=Salinibacter ruber RepID=Q2S6E0_SALRD
Pyridine nucleotide-disulphide oxidoreductase domain protein {ECO:0000313|EMBL:ABC44730.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
pyridine nucleotide-disulfide oxidoreductase domain-containing protein
sw_12_scaffold_223_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2872..4827
DNA (1956bp) protein (652aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
HTR-like protein n=2 Tax=Salinibacter ruber RepID=D5H4R0_SALRM
HTR-like protein
sw_12_scaffold_223_3
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(4889..5662)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002DA808B
Uncharacterized protein {ECO:0000313|EMBL:KIJ75574.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
family 2 glycosyl transferase
sw_12_scaffold_223_4
unknown

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comp(6048..6293)
DNA (246bp) protein (82aa)

This feature has no annotations

sw_12_scaffold_223_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6620..8146)
DNA (1527bp) protein (509aa)
Mercuric reductase {ECO:0000313|EMBL:ABC44112.1}; EC=1.16.1.1 {ECO:0000313|EMBL:ABC44112.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
Mercuric reductase n=2 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6F1_SALRD
mercuric reductase
sw_12_scaffold_223_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8146..8892)
DNA (747bp) protein (249aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:ABC44611.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ABC44611.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
6-phosphogluconolactonase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S483_SALRD
pgl; 6-phosphogluconolactonase
sw_12_scaffold_223_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(9071..10573)
DNA (1503bp) protein (501aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6F0_SALRD
zwf; glucose-6-phosphate 1-dehydrogenase
sw_12_scaffold_223_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(10655..11566)
DNA (912bp) protein (304aa)
gnd; 6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] id=24656896 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
6-phosphogluconate dehydrogenase (Decarboxylating) {ECO:0000313|EMBL:ABC46003.1}; EC=1.1.1.44 {ECO:0000313|EMBL:ABC46003.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
gnd; 6-phosphogluconate dehydrogenase
sw_12_scaffold_223_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(11738..14515)
DNA (2778bp) protein (926aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
tal; bifunctional transaldolase/phosoglucose isomerase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] id=24656897 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tal; bifunctional transaldolase/phosoglucose isomerase
sw_12_scaffold_223_10
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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15043..15468
DNA (426bp) protein (142aa)
Helix-turn-helix transcriptional response regulator, LuxR family n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74DM3_GEOSL
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AJE02934.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geoba
sw_12_scaffold_223_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15569..17347)
DNA (1779bp) protein (593aa)
Sensory box histidine kinase/response regulator n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6K2J6_PSEST
sensor protein
sensory box sensor histidine kinase/response regulator Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
sw_12_scaffold_223_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(17794..19221)
DNA (1428bp) protein (476aa)
Ribose operon repressor n=2 Tax=Salinibacter ruber RepID=D5H5R2_SALRM
rbsR; ribose operon repressor
Ribose operon repressor {ECO:0000313|EMBL:CBH23367.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_223_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(19263..20858)
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDV2_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49096.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_12_scaffold_223_14

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comp(20892..21590)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037374F7
Uncharacterized protein {ECO:0000313|EMBL:KKN32502.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ASPIC/UnbV domain protein
Displaying 14 items

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