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sw_12_scaffold_236

Search features with annotation key words

Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_236_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..175
DNA (174bp) protein (58aa)
hypothetical protein
hypothetical protein id=24659135 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24300.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_236_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(183..1661)
DNA (1479bp) protein (493aa)
TonB family protein
TonB family protein id=24659136 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
TonB family C-terminal domain protein {ECO:0000313|EMBL:ABC44054.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
sw_12_scaffold_236_3
unknown

Not on your lists

1859..2116
DNA (258bp) protein (86aa)

This feature has no annotations

sw_12_scaffold_236_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2202..2915)
DNA (714bp) protein (238aa)
glycosyl transferase-like protein id=24659138 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
glycosyl transferase-like protein
Glycosyl transferase-related protein {ECO:0000313|EMBL:ABC44067.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_12_scaffold_236_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3097..3990)
DNA (894bp) protein (298aa)
Arginine deiminase {ECO:0000313|EMBL:CBH24304.1}; EC=3.5.3.6 {ECO:0000313|EMBL:CBH24304.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
Arginine deiminase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8E9_SALRM
arcA; Arginine deiminase
sw_12_scaffold_236_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4243..5091)
DNA (849bp) protein (283aa)
hypothetical protein
hypothetical protein id=24659140 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24305.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_236_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5230..6180)
DNA (951bp) protein (317aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8F1_SALRM
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBH24306.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_12_scaffold_236_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6244..7440)
DNA (1197bp) protein (399aa)
pgk_tpi; Bifunctional PGK/TIM; K00927 phosphoglycerate kinase [EC:2.7.2.3] id=24659143 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=761659 species="Bacteria;
pgk_tpi; Bifunctional PGK/TIM
sw_12_scaffold_236_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7532..8548)
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Glyceraldehyde-3-phosphate dehydrogenase, type I n=2 Tax=Salinibacter ruber RepID=Q2S3A6_SALRD
gap; glyceraldehyde-3-phosphate dehydrogenase, type I
sw_12_scaffold_236_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8887..9600
DNA (714bp) protein (238aa)
hypothetical protein id=24659145 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:ABC43637.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_12_scaffold_236_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9870..11249
DNA (1380bp) protein (460aa)
C4-dicarboxylate transport transcriptional regulatory protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3A4_SALRD
dctD; C4-dicarboxylate transport transcriptional regulatory protein
C4-dicarboxylate transport transcriptional regulatory protein {ECO:0000313|EMBL:ABC44250.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
sw_12_scaffold_236_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11393..12139
DNA (747bp) protein (249aa)
lipoprotein-releasing system ATP-binding protein lolD; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] id=24659147 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000255|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01708};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Ord
lipoprotein-releasing system ATP-binding protein lolD
sw_12_scaffold_236_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12418..13059
DNA (642bp) protein (214aa)
ATP-dependent protease {ECO:0000313|EMBL:CBH24313.1}; EC=3.4.21.53 {ECO:0000313|EMBL:CBH24313.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
ATP-dependent protease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8F8_SALRM
lon; ATP-dependent protease
sw_12_scaffold_236_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13286..14143
DNA (858bp) protein (286aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3A1_SALRD
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:CBH24314.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_12_scaffold_236_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14218..14466
DNA (249bp) protein (83aa)
signal transducing histidine kinase
signal transducing histidine kinase id=24659150 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Signal transducing histidine kinase {ECO:0000313|EMBL:CBH24315.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_12_scaffold_236_16
unknown

Not on your lists

14474..14659
DNA (186bp) protein (62aa)

This feature has no annotations

sw_12_scaffold_236_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14825..15985
DNA (1161bp) protein (387aa)
hypothetical protein
hypothetical protein id=24659151 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24316.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_236_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16233..16937
DNA (705bp) protein (235aa)
HTH-type transcriptional regulator ttgR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8G2_SALRM
ttgR; TtgR family transcriptional regulator
HTH-type transcriptional regulator ttgR {ECO:0000313|EMBL:CBH24317.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_12_scaffold_236_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17002..17148
DNA (147bp) protein (49aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CBH24318.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CBH24318.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Long-chain-fatty-acid--CoA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8G3_SALRM
fadD; long-chain-fatty-acid--CoA ligase
Displaying 19 items

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