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sw_12_scaffold_300

Search features with annotation key words

Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_300_1
unknown

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2..94
DNA (93bp) protein (31aa)

This feature has no annotations

sw_12_scaffold_300_2
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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126..1175
DNA (1050bp) protein (350aa)
Diacylglycerol kinase catalytic region n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGX1_HALO1
diacylglycerol kinase
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:ACY14693.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" sou
sw_12_scaffold_300_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1378..1710
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7T2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24087.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_300_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2014..2712
DNA (699bp) protein (233aa)
GMP synthase {ECO:0000313|EMBL:CBH24086.1}; EC=6.3.5.2 {ECO:0000313|EMBL:CBH24086.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
GMP synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7T1_SALRM
guaA; GMP synthase
sw_12_scaffold_300_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2757..4622
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7T0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24085.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_300_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4774..6744)
DNA (1971bp) protein (657aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=761659 species="Bacteria; Bacteroidete
DNA primase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7S9_SALRM
dnaG; DNA primase
sw_12_scaffold_300_7
Salinibacter_ruber, Salinibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6823..6981)
DNA (159bp) protein (53aa)
id=24658889 bin=Salinibacter_ruber tax=Salinibacter_ruber
id=24658889 bin=Salinibacter_ruber tax=Salinibacter_ruber
sw_12_scaffold_300_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7404..8243
DNA (840bp) protein (280aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:ABC45377.1}; EC=2.3.1.117 {ECO:0000313|EMBL:ABC45377.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroide
Tetrahydrodipicolinate N-succinyltransferase n=2 Tax=Salinibacter ruber RepID=D5H7S8_SALRM
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
sw_12_scaffold_300_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8293..8493)
DNA (201bp) protein (67aa)
hypothetical protein
hypothetical protein id=24658887 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24082.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_300_10
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8977..9858)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UQZ0_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC48969.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
sw_12_scaffold_300_11
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9960..10502)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UM72_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC48970.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
sw_12_scaffold_300_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10866..11075)
DNA (210bp) protein (70aa)
cspC; cold-shock DNA-binding protein
cspC; cold-shock DNA-binding protein; K03704 cold shock protein (beta-ribbon, CspA family) id=24658885 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
'Cold-shock' DNA-binding domain {ECO:0000313|EMBL:CBH24080.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
sw_12_scaffold_300_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11423..11764)
DNA (342bp) protein (114aa)
ATP-dependent Clp protease adaptor protein ClpS, putative n=2 Tax=Salinibacter ruber RepID=Q2S3Y5_SALRD
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adaptor protein ClpS, putative {ECO:0000313|EMBL:ABC45161.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_12_scaffold_300_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11848..12126)
DNA (279bp) protein (93aa)
purL; phosphoribosylformylglycinamidine (FGAM) synthase; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=24658882 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926, ECO:0000
purL; phosphoribosylformylglycinamidine (FGAM) synthase
sw_12_scaffold_300_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12180..13061)
DNA (882bp) protein (294aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:CBH24076.1}; EC=2.7.8.8 {ECO:0000313|EMBL:CBH24076.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. In
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7S1_SALRM
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase
sw_12_scaffold_300_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13319..13771)
DNA (453bp) protein (151aa)
psd; phosphatidylserine decarboxylase proenzyme; K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] id=24658880 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=761659
psd; phosphatidylserine decarboxylase proenzyme
sw_12_scaffold_300_17
unknown

Not on your lists

comp(13849..14391)
DNA (543bp) protein (181aa)

This feature has no annotations

sw_12_scaffold_300_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14445..15041)
DNA (597bp) protein (199aa)
hypothetical protein
hypothetical protein id=24659378 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24541.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_300_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15076..15756)
DNA (681bp) protein (227aa)
acyltransferase
acyltransferase id=24659379 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Acyltransferase {ECO:0000313|EMBL:CBH24542.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strai
sw_12_scaffold_300_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15862..15957)
DNA (96bp) protein (32aa)
Phytoene synthase {ECO:0000313|EMBL:CBH24543.1}; EC=2.5.1.- {ECO:0000313|EMBL:CBH24543.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
Displaying 20 items

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