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sw_12_scaffold_358

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_358_1
unknown

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comp(2..331)
DNA (330bp) protein (110aa)

This feature has no annotations

sw_12_scaffold_358_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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661..2442
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YG60_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41848.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
sw_12_scaffold_358_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2591..3301
DNA (711bp) protein (237aa)
Ribosomal large subunit pseudouridine synthase D n=2 Tax=Salinibacter ruber RepID=D5HA22_SALRM
rluA; ribosomal large subunit pseudouridine synthase A
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:ABC44497.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
sw_12_scaffold_358_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3421..4404
DNA (984bp) protein (328aa)
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066, ECO:0000313|EMBL:CBH24876.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Coproporphyrinogen III oxidase, aerobic n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA21_SALRM
hemF; Coproporphyrinogen III oxidase, aerobic
sw_12_scaffold_358_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4535..5878
DNA (1344bp) protein (448aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase n=2 Tax=Salinibacter ruber RepID=D5HA20_SALRM
hemH; ferrochelatase
sw_12_scaffold_358_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5929..6537
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA19_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24874.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_358_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6596..7912
DNA (1317bp) protein (439aa)
hemL; glutamate-1-semialdehyde 2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] id=24659701 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
hemL; glutamate-1-semialdehyde 2,1-aminomutase
sw_12_scaffold_358_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8046..8330)
DNA (285bp) protein (95aa)
hypothetical protein
hypothetical protein id=24659699 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24871.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_358_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8712..9635
DNA (924bp) protein (308aa)
Universal stress protein Usp n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA14_SALRM
usp; universal stress protein Usp
Universal stress protein Usp {ECO:0000313|EMBL:CBH24869.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_358_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9685..9939
DNA (255bp) protein (85aa)
universal stress protein
universal stress protein id=24659697 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Universal stress protein {ECO:0000313|EMBL:ABC45642.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_12_scaffold_358_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9944..10342
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HA12_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24867.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_358_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10404..11225)
DNA (822bp) protein (274aa)
pyrF; orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=24659695 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=309807 species="Bacte
pyrF; orotidine 5'-phosphate decarboxylase
sw_12_scaffold_358_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11530..13641
DNA (2112bp) protein (704aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ABC44685.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
mmgC; acyl-CoA dehydrogenase id=24659694 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
acyl-CoA dehydrogenase
sw_12_scaffold_358_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13937..14668
DNA (732bp) protein (244aa)
Acetylglutamate kinase {ECO:0000313|EMBL:CBH24864.1}; EC=2.7.2.8 {ECO:0000313|EMBL:CBH24864.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
argB; Acetylglutamate kinase
argB; Acetylglutamate kinase id=24659693 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_12_scaffold_358_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14842..15033
DNA (192bp) protein (64aa)
hypothetical protein
hypothetical protein id=24659692 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24863.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_358_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15276..16220
DNA (945bp) protein (315aa)
hypothetical protein
hypothetical protein id=24659691 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24862.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_358_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16261..18519
DNA (2259bp) protein (753aa)
hypothetical protein id=24659690 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45490.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_358_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18688..19998
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA06_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24861.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_358_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20198..20413)
DNA (216bp) protein (72aa)
csp; cold-shock protein
csp; cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) id=24659688 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cold shock-like protein {ECO:0000313|EMBL:CBH24860.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_358_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20824..21882
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA04_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24859.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_358_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21918..22214
DNA (297bp) protein (99aa)
Integral membrane protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA03_SALRM
hypothetical protein
Integral membrane protein {ECO:0000313|EMBL:CBH24858.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
Displaying 21 items

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