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sw_12_scaffold_36

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_36_1
unknown

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29..211
DNA (183bp) protein (61aa)

This feature has no annotations

sw_12_scaffold_36_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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466..798
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S157_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44367.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_36_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(822..1673)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1C0_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45327.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_36_4
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

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comp(1787..2620)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I010_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KKU12207.1}; TaxID=1618932 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
hypothetical protein
sw_12_scaffold_36_5
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

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comp(2649..3677)
DNA (1029bp) protein (343aa)
mvaD; diphosphomevalonate decarboxylase (EC:4.1.1.33); K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
Diphosphomevalonate decarboxylase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5R2_CALAS
mvaD; diphosphomevalonate decarboxylase
sw_12_scaffold_36_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3925..5004)
DNA (1080bp) protein (360aa)
mevalonate kinase (EC:2.7.1.36)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BGE5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJZ41404.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresce
sw_12_scaffold_36_7
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5033..6349)
DNA (1317bp) protein (439aa)
3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZRL4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KJZ41403.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresce
HMG1; hydroxymethylglutaryl-CoA reductase
sw_12_scaffold_36_8
R_OP11_Woesebacteria_44_24b, Woesebacteria, Microgenomates, Bacteria

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comp(6359..7414)
DNA (1056bp) protein (352aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2) Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_44_24b_curated
isopentenyl pyrophosphate isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Thermosynechococcus elongatus (strain BP-1) RepID=IDI2_THEEB
sw_12_scaffold_36_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8059..9243)
DNA (1185bp) protein (395aa)
dnaX; DNA polymerase III subunit gamma/tau; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] id=24657733 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA polymerase III gamma/tau subunit {ECO:0000313|EMBL:CBH23962.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH23962.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
dnaX; DNA polymerase III subunit gamma/tau
sw_12_scaffold_36_trna_1
unknown

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9499..9572
DNA (74bp)
transferRNA
sw_12_scaffold_36_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(9711..11912)
DNA (2202bp) protein (734aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489, ECO:0000313|EMBL:CBH23953.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroid
glgX; glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-] id=24657724 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
glgX; glycogen debranching protein GlgX
sw_12_scaffold_36_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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12158..14149
DNA (1992bp) protein (664aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alph
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7E7_SALRM
glycosidase
sw_12_scaffold_36_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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14268..17648
DNA (3381bp) protein (1127aa)
trehalose synthase; K05343 maltose alpha-D-glucosyltransferase [EC:5.4.99.16] id=24657722 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
trehalose synthase
Trehalose synthase {ECO:0000313|EMBL:ABC44183.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_12_scaffold_36_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17851..19719
DNA (1869bp) protein (623aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685, ECO:0000313|EMBL:CBH23950.1};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7E5_SALRM
glgB; 1,4-alpha-glucan-branching protein
sw_12_scaffold_36_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20145..22709
DNA (2565bp) protein (855aa)
TonB-dependent outer membrane protein
Putative TonB-dependent outer membrane protein {ECO:0000313|EMBL:ABC44624.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
TonB-dependent outer membrane protein id=24657719 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_12_scaffold_36_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22783..24159
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7E2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23947.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_36_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24243..25805
DNA (1563bp) protein (521aa)
hypothetical protein
hypothetical protein id=24657717 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44295.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_36_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25789..27153
DNA (1365bp) protein (455aa)
Amine oxidase, flavin-containing superfamily n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7E0_SALRM
amine oxidase
Amine oxidase, flavin-containing superfamily {ECO:0000313|EMBL:CBH23945.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
sw_12_scaffold_36_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27172..27600)
DNA (429bp) protein (143aa)
hypothetical protein
hypothetical protein id=24657715 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23944.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_36_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27648..28889)
DNA (1242bp) protein (414aa)
hypothetical protein
hypothetical protein id=24657714 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23943.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_36_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(28945..30252)
DNA (1308bp) protein (436aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4A7_SALRD
hisS; histidyl-tRNA synthetase
sw_12_scaffold_36_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30559..31044)
DNA (486bp) protein (162aa)
PTS system, IIA component n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4A8_SALRD
PTS system transporter subunit IIA
PTS system, IIA component {ECO:0000313|EMBL:ABC45257.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_12_scaffold_36_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31468..32271)
DNA (804bp) protein (268aa)
Putative phosphohydrolases n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAQ0_SALRM
phosphohydrolase
Putative phosphohydrolases {ECO:0000313|EMBL:CBH25105.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_12_scaffold_36_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32510..33631)
DNA (1122bp) protein (374aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137, ECO:0000313|EMBL:CBH25106.1};; TaxID=761659 species="Bacteria
Pyruvate dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAQ1_SALRM
pdhC; pyruvate dehydrogenase
Displaying 24 items

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