ggKbase home page

sw_12_scaffold_444

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_444_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..108)
DNA (108bp) protein (36aa)
Na+-dependent transporter n=1 Tax=Salisaeta longa RepID=UPI0003B569F5
sodium-and chloride-dependent transporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain
sw_12_scaffold_444_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(369..617)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H7K9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24014.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_444_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(791..2044)
DNA (1254bp) protein (418aa)
ald; Alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] id=24657784 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Alanine dehydrogenase {ECO:0000313|EMBL:CBH24015.1}; EC=1.4.1.1 {ECO:0000313|EMBL:CBH24015.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
ald; Alanine dehydrogenase
sw_12_scaffold_444_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2310..3215
DNA (906bp) protein (302aa)
NADP oxidoreductase coenzyme F420-dependent superfamily n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7L1_SALRM
NADP oxidoreductase coenzyme F420-dependent superfamily
NADP oxidoreductase coenzyme F420-dependent superfamily {ECO:0000313|EMBL:CBH24016.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
sw_12_scaffold_444_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3425..4045
DNA (621bp) protein (207aa)
hypothetical protein
hypothetical protein id=24657786 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24017.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_444_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4216..5757
DNA (1542bp) protein (514aa)
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] id=24657787 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
lysS; lysyl-tRNA synthetase
sw_12_scaffold_444_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5879..6868)
DNA (990bp) protein (330aa)
PKD repeat protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7L4_SALRM
PKD repeat protein
Conserved protein {ECO:0000313|EMBL:ABC45430.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
sw_12_scaffold_444_8
unknown

Not on your lists

6988..7560
DNA (573bp) protein (191aa)

This feature has no annotations

sw_12_scaffold_444_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(7497..7751)
DNA (255bp) protein (85aa)
rpsT; 30S ribosomal protein S20
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 id=24657789 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500, ECO:0000313|EMBL:CBH24020.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_12_scaffold_444_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7990..8892
DNA (903bp) protein (301aa)
membrane peptidase id=24657790 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
membrane peptidase
Putative membrane peptidase {ECO:0000313|EMBL:CBH24021.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_444_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9543..10013
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H7L7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24022.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_444_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10095..10367
DNA (273bp) protein (91aa)
hypothetical protein
hypothetical protein id=24657792 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24023.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_444_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10567..10875
DNA (309bp) protein (103aa)
hypothetical protein
hypothetical protein id=24657793 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24024.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_444_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10923..12152
DNA (1230bp) protein (410aa)
ATP synthase subunit a n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S436_SALRD
ATP synthase F0 subunit A
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
sw_12_scaffold_444_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12237..12473
DNA (237bp) protein (79aa)
ATP synthase F0 subunit C n=1 Tax=Salisaeta longa RepID=UPI0003B6D118
atpH; ATP synthase subunit C
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_12_scaffold_444_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12549..13058
DNA (510bp) protein (170aa)
atpF; ATP synthase subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] id=24657796 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
atpF; ATP synthase subunit B
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:
sw_12_scaffold_444_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13117..13695
DNA (579bp) protein (193aa)
atpH; ATP synthase subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] id=24657797 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
atpH; ATP synthase subunit delta
ATP synthase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; S
sw_12_scaffold_444_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13885..15534
DNA (1650bp) protein (550aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346, ECO:0000313|EMBL:CBH24029.1};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:
ATP synthase subunit alpha n=2 Tax=Salinibacter ruber RepID=ATPA_SALRD
atpA; ATP synthase subunit alpha
sw_12_scaffold_444_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15703..16629
DNA (927bp) protein (309aa)
ATP synthase gamma chain n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7M5_SALRM
atpG; ATP synthase subunit gamma
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815, ECO:0000313|EMBL:CBH24030.1}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAM
sw_12_scaffold_444_trna_1
unknown

Not on your lists

16732..16827
DNA (96bp)
transferRNA
sw_12_scaffold_444_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16995..18134
DNA (1140bp) protein (380aa)
recD; deoxyribonuclease; K01144 exodeoxyribonuclease V [EC:3.1.11.5] id=24657801 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative deoxyribonuclease {ECO:0000313|EMBL:CBH24032.1}; EC=3.1.11.5 {ECO:0000313|EMBL:CBH24032.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
recD; deoxyribonuclease
Displaying 21 items

View Taxonomy