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sw_12_scaffold_458

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_458_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3..98
DNA (96bp) protein (32aa)
Phytoene synthase {ECO:0000313|EMBL:CBH24543.1}; EC=2.5.1.- {ECO:0000313|EMBL:CBH24543.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_12_scaffold_458_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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201..1343
DNA (1143bp) protein (381aa)
wcaA; family 2 glycosyl transferase
wcaA; family 2 glycosyl transferase id=24659377 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl transferase, family 2 {ECO:0000313|EMBL:CBH24540.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_12_scaffold_458_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1412..1648
DNA (237bp) protein (79aa)
hypothetical protein
hypothetical protein id=24659376 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24539.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_458_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1699..2628
DNA (930bp) protein (310aa)
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:CBH24538.1}; EC=3.4.17.13 {ECO:0000313|EMBL:CBH24538.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Muramoyltetrapeptide carboxypeptidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H933_SALRM
ldcA; Muramoyltetrapeptide carboxypeptidase
sw_12_scaffold_458_5
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2685..3155)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2M1E3_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD51605.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira
sw_12_scaffold_458_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3177..3632)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H553_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23158.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_458_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3853..4455
DNA (603bp) protein (201aa)
Transcription elongation factor GreA n=2 Tax=Salinibacter ruber RepID=D5H932_SALRM
greA; transcription elongation factor greA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=761659 species="Bacteria
sw_12_scaffold_458_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4559..5554
DNA (996bp) protein (332aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;;
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHP9_RHOM4
monofunctional biosynthetic peptidoglycan transglycosylase
sw_12_scaffold_458_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5586..6629
DNA (1044bp) protein (348aa)
Threonine aldolase {ECO:0000313|EMBL:CBH24536.1}; EC=4.1.2.5 {ECO:0000313|EMBL:CBH24536.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
Threonine aldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H931_SALRM
ltaE; threonine aldolase
sw_12_scaffold_458_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6650..7261)
DNA (612bp) protein (204aa)
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:CBH24535.1}; EC=1.4.3.5 {ECO:0000313|EMBL:CBH24535.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H930_SALRM
pdxH; pyridoxamine 5'-phosphate oxidase
sw_12_scaffold_458_11
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7326..8411)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B3284C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ65049.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
sw_12_scaffold_458_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8670..9332)
DNA (663bp) protein (221aa)
mhpD; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
mhpD; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase id=24659371 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:ABC44266.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
sw_12_scaffold_458_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


9467..9970
DNA (504bp) protein (168aa)
50S ribosomal protein L21 n=2 Tax=Salinibacter ruber RepID=RL21_SALRD
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_12_scaffold_458_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10525..11766
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H926_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24531.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_458_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11759..12685)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H925_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24530.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_458_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13072..15150
DNA (2079bp) protein (693aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] id=24659366 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
peptidyl-prolyl cis-trans isomerase
sw_12_scaffold_458_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15165..16028)
DNA (864bp) protein (288aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H923_SALRM
dapF; diaminopimelate epimerase
sw_12_scaffold_458_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16138..17097
DNA (960bp) protein (320aa)
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins id=24659364 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
PhoH family protein
PhoH-lihe protein {ECO:0000313|EMBL:CBH24527.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
sw_12_scaffold_458_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17298..17951)
DNA (654bp) protein (218aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABC45405.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ABC45405.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
hypothetical protein id=24656764 bin=Salinibacter_J07SB67 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_J07SB67
3-hydroxybutyryl-CoA dehydrogenase
Displaying 19 items

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