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sw_12_scaffold_653

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_653_1
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..895
DNA (894bp) protein (298aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ78159.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
sw_12_scaffold_653_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1086..2036
DNA (951bp) protein (317aa)
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein id=24658619 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABC44491.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_12_scaffold_653_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2079..2999
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ61_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43785.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_653_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2954..3286
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ61_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43785.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_653_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3572..4957
DNA (1386bp) protein (462aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000313|EMBL:CBH25811.1}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rul
Trigger factor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCQ6_SALRM
tig; trigger factor Tig
sw_12_scaffold_653_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5142..5888
DNA (747bp) protein (249aa)
clpP; ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=24658622 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
clpP; ATP-dependent Clp protease proteolytic subunit
sw_12_scaffold_653_trna_2
unknown

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comp(6061..6135)
DNA (75bp)
transferRNA
sw_12_scaffold_653_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6503..7993
DNA (1491bp) protein (497aa)
peptidyl-prolyl cis-trans isomerase domain-containing protein; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] id=24658623 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
peptidyl-prolyl cis-trans isomerase domain-containing protein
sw_12_scaffold_653_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8492..8803
DNA (312bp) protein (104aa)
hypothetical protein
HD domain-containing protein; K06950 uncharacterized protein id=24658625 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25814.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_653_9
unknown

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9110..9280
DNA (171bp) protein (57aa)

This feature has no annotations

sw_12_scaffold_653_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9393..9968
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ55_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44527.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_653_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10062..11246
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCR1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25816.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_653_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11287..12063
DNA (777bp) protein (259aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CBH25817.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBH25817.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCR2_SALRM
fabG; 3-oxoacyl-ACP reductase
sw_12_scaffold_653_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12496..13284)
DNA (789bp) protein (263aa)
Alpha/beta hydrolase fold n=2 Tax=Salinibacter ruber RepID=D5HCR3_SALRM
3-oxoadipate enol-lactone hydrolase
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CBH25818.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_12_scaffold_653_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13434..14126
DNA (693bp) protein (231aa)
phaR; polyhydroxyalkanoate synthesis repressor PhaR
phaR; polyhydroxyalkanoate synthesis repressor PhaR id=24658630 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:CBH25819.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
sw_12_scaffold_653_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14195..14686
DNA (492bp) protein (164aa)
phaF; poly(hydroxyalcanoate) granule associated protein
phaF; poly(hydroxyalcanoate) granule associated protein id=24658631 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Poly(Hydroxyalcanoate) granule associated protein {ECO:0000313|EMBL:CBH25820.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
sw_12_scaffold_653_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14860..16182
DNA (1323bp) protein (441aa)
Phospholipase, patatin family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ49_SALRD
patatin family phospholipase
Phospholipase, patatin family {ECO:0000313|EMBL:ABC44746.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_12_scaffold_653_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16208..18073)
DNA (1866bp) protein (622aa)
Ubiquinone biosynthesis protein ubiB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCR7_SALRM
ubiB; ubiquinone biosynthesis protein ubiB
Ubiquinone biosynthesis protein ubiB {ECO:0000313|EMBL:CBH25822.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_12_scaffold_653_18
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18384..19772)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00035FA7AA
Peptidase M23 {ECO:0000313|EMBL:EJF09288.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
peptidase M23
sw_12_scaffold_653_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20028..21290)
DNA (1263bp) protein (421aa)
Deoxyguanosine kinase/deoxyadenosine kinase subunit n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3Z3_SALRD
dck; deoxyguanosine kinase/deoxyadenosine kinase subunit
Deoxyguanosine kinase/deoxyadenosine kinase subunit {ECO:0000313|EMBL:ABC45866.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
sw_12_scaffold_653_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21678..22517
DNA (840bp) protein (280aa)
ParA family protein
ParA family protein id=24658871 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ParA family protein {ECO:0000313|EMBL:ABC43977.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_12_scaffold_653_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22561..23013
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3Z7_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46009.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_653_22
unknown

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comp(22867..23226)
DNA (360bp) protein (120aa)

This feature has no annotations

sw_12_scaffold_653_23
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23319..24740)
DNA (1422bp) protein (474aa)
sialate O-acetylesterase (EC:3.1.1.53); K05970 sialate O-acetylesterase [EC:3.1.1.53] Tax=RBG_16_Planctomycetes_64_12_curated
sialate O-acetylesterase (EC:3.1.1.53)
Sialate O-acetylesterase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QX68_PIRSD
sw_12_scaffold_653_24
unknown

Not on your lists

comp(24812..24922)
DNA (111bp) protein (37aa)

This feature has no annotations

sw_12_scaffold_653_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25271..26020
DNA (750bp) protein (250aa)
DNA polymerase III polC-type {ECO:0000313|EMBL:CBH24064.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH24064.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
Exonuclease, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3Z9_SALRD
polC; DNA polymerase III polC-type
sw_12_scaffold_653_26
Salinibacter_ruber, Salinibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26155..26361)
DNA (207bp) protein (69aa)
id=24658867 bin=Salinibacter_ruber tax=Salinibacter_ruber
id=24658867 bin=Salinibacter_ruber tax=Salinibacter_ruber
sw_12_scaffold_653_trna_1
unknown

Not on your lists

comp(26394..26466)
DNA (73bp)
transferRNA
sw_12_scaffold_653_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26608..27183
DNA (576bp) protein (192aa)
alpha/beta hydrolase
alpha/beta hydrolase id=24658866 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hydrolase, alpha/beta fold family protein {ECO:0000313|EMBL:ABC43574.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source=
Displaying 29 items

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