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sw_12_scaffold_83

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_83_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..835)
DNA (834bp) protein (278aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Tryptophan synthase beta chain n=2 Tax=Salinibacter ruber RepID=D5H9U0_SALRM
trpB; tryptophan synthase subunit beta
sw_12_scaffold_83_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(942..1592)
DNA (651bp) protein (217aa)
trpF; N-(5'phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] id=24659627 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
trpF; N-(5'phosphoribosyl)anthranilate isomerase
sw_12_scaffold_83_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1830..2642)
DNA (813bp) protein (271aa)
trpC; Indole-3-glycerol phosphate synthase; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] id=24659626 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:
trpC; Indole-3-glycerol phosphate synthase
sw_12_scaffold_83_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2920..3954)
DNA (1035bp) protein (345aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=761659 spe
Anthranilate phosphoribosyltransferase n=2 Tax=Salinibacter ruber RepID=TRPD_SALRD
trpD; anthranilate phosphoribosyltransferase
sw_12_scaffold_83_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3993..4595)
DNA (603bp) protein (201aa)
pabA; para-aminobenzoate synthase glutamine amidotransferase component ii; K01658 anthranilate synthase component II [EC:4.1.3.27] id=24659624 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II {ECO:0000313|EMBL:ABC45876.1}; EC=2.6.1.85 {ECO:0000313|EMBL:ABC45876.1};; EC=4.1.3.27 {ECO:0000313|EMBL:ABC45876.1};; T
para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II
sw_12_scaffold_83_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(4640..5116)
DNA (477bp) protein (159aa)
S23 ribosomal protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KK19_CYAP7
S23 ribosomal protein Tax=RBG_16_Chloroflexi_63_12_curated
S23 ribosomal protein
sw_12_scaffold_83_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5148..6182)
DNA (1035bp) protein (345aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=2 Tax=Salinibacter ruber RepID=D5H9T5_SALRM
trpS; tryptophanyl-tRNA synthetase
sw_12_scaffold_83_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6233..6715)
DNA (483bp) protein (161aa)
hypothetical protein
hypothetical protein id=24659622 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24789.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_83_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6832..8376)
DNA (1545bp) protein (515aa)
Anthranilate synthase component I {ECO:0000313|EMBL:CBH24788.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CBH24788.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
Anthranilate synthase component I n=2 Tax=Salinibacter ruber RepID=D5H9T3_SALRM
trpE; anthranilate synthase component I
sw_12_scaffold_83_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8725..9963
DNA (1239bp) protein (413aa)
hypothetical protein
hypothetical protein id=24659620 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24787.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_83_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10069..10875
DNA (807bp) protein (269aa)
Uncharacterized ACR, COG1434 family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S202_SALRD
hypothetical protein
Uncharacterized ACR, COG1434 family {ECO:0000313|EMBL:ABC44208.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_12_scaffold_83_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10872..11348
DNA (477bp) protein (159aa)
hypothetical protein id=24659617 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24783.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_83_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11496..13139
DNA (1644bp) protein (548aa)
Peptide chain release factor 3 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9S7_SALRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroid
prfC; peptide chain release factor 3
sw_12_scaffold_83_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13428..14681
DNA (1254bp) protein (418aa)
ylnA; anion permease
ylnA; anion permease; K03306 inorganic phosphate transporter, PiT family id=24659615 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Anion permease {ECO:0000313|EMBL:ABC46004.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain
sw_12_scaffold_83_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14742..15158
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SGY8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24779.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_83_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15238..16956
DNA (1719bp) protein (573aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CBH24777.1}; EC=6.3.5.- {ECO:0000313|EMBL:CBH24777.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9S2_SALRM
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A
sw_12_scaffold_83_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17092..18048
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S208_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45691.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_83_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18199..19248
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Salinibacter ruber RepID=D5H9S0_SALRM
queuosine biosynthesis protein
sw_12_scaffold_83_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19305..20057
DNA (753bp) protein (251aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9R9_SALRM
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
sw_12_scaffold_83_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20087..20560
DNA (474bp) protein (158aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Salinibacter ruber RepID=ISPF_SALRD
ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
sw_12_scaffold_83_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20592..21266
DNA (675bp) protein (225aa)
DedA family protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S212_SALRD
dedA; DedA family protein
Putative DedA family protein {ECO:0000313|EMBL:CBH24772.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_83_trna_1
unknown

Not on your lists

21336..21408
DNA (73bp)
transferRNA
sw_12_scaffold_83_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21966..25754
DNA (3789bp) protein (1263aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Two-component sensor histidine kinase n=2 Tax=Salinibacter ruber RepID=D5HAX9_SALRM
two-component sensor histidine kinase
sw_12_scaffold_83_23
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25883..26077
DNA (195bp) protein (65aa)
DNA helicase n=1 Tax=Salisaeta longa RepID=UPI0003B7687D
Uncharacterized protein {ECO:0000313|EMBL:KEI66291.1}; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126
hypothetical protein
Displaying 24 items

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