ggKbase home page

sw_12_scaffold_86

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_86_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..2198)
DNA (2196bp) protein (732aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=309807 species="Bacteria; B
Primosomal protein N n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYZ4_SALRD
priA; primosomal protein N'
sw_12_scaffold_86_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2327..3448)
DNA (1122bp) protein (374aa)
THUMP domain/methyltransferase domain-containing protein; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] id=24658769 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
THUMP domain/methyltransferase domain-containing protein
THUMP domain/methyltransferase domain protein {ECO:0000313|EMBL:ABC45842.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
sw_12_scaffold_86_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3621..4178
DNA (558bp) protein (186aa)
Thioredoxin, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYS1_SALRD
thioredoxin
Thioredoxin, putative {ECO:0000313|EMBL:ABC45361.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_12_scaffold_86_4
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4582..4806
DNA (225bp) protein (75aa)
Transcriptional regulator n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4RIH7_9CAUL
transcriptional regulator/antitoxin MazE Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
putative addiction module antidote
sw_12_scaffold_86_5
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4813..5214
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI000374ABC9
death-on-curing family protein; K07341 death on curing protein Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
death-on-curing family protein
sw_12_scaffold_86_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5220..6953
DNA (1734bp) protein (578aa)
Amidohydrolase family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD47_SALRM
amidohydrolase
Amidohydrolase family protein {ECO:0000313|EMBL:CBH25952.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_12_scaffold_86_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7077..8321)
DNA (1245bp) protein (415aa)
hypothetical protein
hypothetical protein id=24658759 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45151.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_86_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8615..10618)
DNA (2004bp) protein (668aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD43_SALRM
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBH25948.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_12_scaffold_86_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10848..11183)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD42_SALRM
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_86_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11210..11617)
DNA (408bp) protein (136aa)
dopamine receptor D4
dopamine receptor D4 id=24658756 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dopamine receptor D4 {ECO:0000313|EMBL:ABC46345.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
sw_12_scaffold_86_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11950..14460)
DNA (2511bp) protein (837aa)
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] id=24658755 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phenylalanine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00283};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283};
pheT; phenylalanyl-tRNA synthetase subunit beta
sw_12_scaffold_86_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(14684..15697)
DNA (1014bp) protein (338aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD39_SALRM
pheS; phenylalanyl-tRNA synthetase subunit alpha
sw_12_scaffold_86_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16291..17646)
DNA (1356bp) protein (452aa)
Bacterial sugar transferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Q4_SALRM
sugar transferase
Bacterial sugar transferase {ECO:0000313|EMBL:CBH23709.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_86_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17945..18466
DNA (522bp) protein (174aa)
Putative transcriptional regulator NusG/RfaH family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCX3_SALRM
NusG/RfaH family transcriptional regulator
Putative transcriptional regulator NusG/RfaH family {ECO:0000313|EMBL:CBH25878.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
sw_12_scaffold_86_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18577..19254
DNA (678bp) protein (226aa)
hypothetical protein
hypothetical protein id=24657037 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46153.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_86_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19727..21655)
DNA (1929bp) protein (643aa)
glycosyltransferase; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] id=24657481 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
glycosyltransferase
Probable glycosyltransferase {ECO:0000313|EMBL:ABC44638.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_86_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21916..23382)
DNA (1467bp) protein (489aa)
Putative colanic acid biosynthesis glycosyl transferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4X0_SALRD
colanic acid biosynthesis glycosyl transferase
Putative colanic acid biosynthesis glycosyl transferase {ECO:0000313|EMBL:ABC45543.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
sw_12_scaffold_86_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23643..25142
DNA (1500bp) protein (500aa)
PKD domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYN4_SALRD
PKD domain-containing protein
PKD domain protein {ECO:0000313|EMBL:ABC44340.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_12_scaffold_86_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26649..27641)
DNA (993bp) protein (331aa)
UDP-glucuronate 5'-epimerase {ECO:0000313|EMBL:CBH23636.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CBH23636.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
UDP-glucuronate 5'-epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6I1_SALRM
lspL; UDP-glucuronate 5'-epimerase
sw_12_scaffold_86_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27725..27937)
DNA (213bp) protein (71aa)
Sulfotransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6I0_SALRM
Sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:CBH23635.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
Displaying 20 items

View Taxonomy