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sw_12_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_90_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(357..1331)
DNA (975bp) protein (325aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C9_SALRM
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase
sw_12_scaffold_90_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1381..2415)
DNA (1035bp) protein (345aa)
HTH-type transcriptional regulator celR
HTH-type transcriptional regulator celR; K02529 LacI family transcriptional regulator id=24659464 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
HTH-type transcriptional regulator celR {ECO:0000313|EMBL:ABC45871.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_12_scaffold_90_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2464..3303)
DNA (840bp) protein (280aa)
hypothetical protein
hypothetical protein id=24659463 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24632.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_90_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3647..5017
DNA (1371bp) protein (457aa)
GTP cyclohydrolase II {ECO:0000256|SAAS:SAAS00129532}; EC=3.5.4.25 {ECO:0000256|SAAS:SAAS00129532};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
riboflavin-specific deaminase/GTP cyclohydrolase II
riboflavin-specific deaminase/GTP cyclohydrolase II id=24659462 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_12_scaffold_90_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5075..6124
DNA (1050bp) protein (350aa)
Putative zinc-binding dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C5_SALRM
zinc-binding dehydrogenase
Putative zinc-binding dehydrogenase {ECO:0000313|EMBL:CBH24630.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_12_scaffold_90_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6165..6533
DNA (369bp) protein (123aa)
Putative 6-pyruvoyl tetrahydrobiopterin synthase {ECO:0000313|EMBL:CBH24629.1}; EC=4.2.3.12 {ECO:0000313|EMBL:CBH24629.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
Putative 6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C4_SALRM
ygcM; 6-pyruvoyl tetrahydrobiopterin synthase
sw_12_scaffold_90_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6684..7418
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2F1_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24628.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_90_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7447..8541)
DNA (1095bp) protein (365aa)
Tyrosine recombinase xerD n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C2_SALRM
xerD; tyrosine recombinase XerD
Tyrosine recombinase xerD {ECO:0000313|EMBL:CBH24627.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_12_scaffold_90_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8770..9672)
DNA (903bp) protein (301aa)
phage integrase domain/SAM domain-containing protein
phage integrase domain/SAM domain-containing protein id=24659457 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phage integrase, N-terminal SAM-like domain protein {ECO:0000313|EMBL:ABC45087.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
sw_12_scaffold_90_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9864..11075)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9B9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24624.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_90_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11164..11790)
DNA (627bp) protein (209aa)
cyclase superfamily protein; K07130 arylformamidase [EC:3.5.1.9] id=24659455 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Kynurenine formamidase {ECO:0000255|HAMAP-Rule:MF_01969}; Short=KFA {ECO:0000255|HAMAP-Rule:MF_01969};; Short=KFase {ECO:0000255|HAMAP-Rule:MF_01969};; EC=3.5.1.9 {ECO:0000255|HAMAP-Rule:MF_01969};; A
cyclase superfamily protein
sw_12_scaffold_90_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12330..13856
DNA (1527bp) protein (509aa)
Beta-carotene ketolase {ECO:0000313|EMBL:CBH24621.1}; EC=1.14.99.- {ECO:0000313|EMBL:CBH24621.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
crtI; beta-carotene ketolase
crtI; beta-carotene ketolase id=24659453 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_12_scaffold_90_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13901..14644
DNA (744bp) protein (248aa)
Phytoene synthase-related protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9B5_SALRM
phytoene synthase-like protein
Phytoene synthase-related protein {ECO:0000313|EMBL:CBH24620.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
sw_12_scaffold_90_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14736..15665
DNA (930bp) protein (310aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] id=24659450 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
sw_12_scaffold_90_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15808..17121)
DNA (1314bp) protein (438aa)
hypothetical protein
hypothetical protein id=24659449 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24617.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_90_16
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(17204..21544)
DNA (4341bp) protein (1447aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B39232
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACF14181.1}; Flags: Precursor;; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" so
sw_12_scaffold_90_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21723..22793)
DNA (1071bp) protein (357aa)
Aminopeptidase P, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2G1_SALRD
aminopeptidase P
Aminopeptidase P, putative {ECO:0000313|EMBL:ABC44278.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_12_scaffold_90_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22799..24325)
DNA (1527bp) protein (509aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2G2_SALRD
guaB; inosine-5'-monophosphate dehydrogenase
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
sw_12_scaffold_90_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24336..25094)
DNA (759bp) protein (253aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887, ECO:0000313|EMBL:CBH24614.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
Pseudouridine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9A9_SALRM
rluB; ribosomal large subunit pseudouridine synthase B
sw_12_scaffold_90_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25313..26023)
DNA (711bp) protein (237aa)
scpB; segregation and condensation protein B
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B id=24659445 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_12_scaffold_90_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26108..26632)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9A7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24612.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_90_22
unknown

Not on your lists

26916..27101
DNA (186bp) protein (62aa)

This feature has no annotations

sw_12_scaffold_90_23
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

27279..28619
DNA (1341bp) protein (447aa)
Methyltransferase family protein n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GH22_9CYAN
C-methyltransferase Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
methyltransferase family protein
sw_12_scaffold_90_24

Not on your lists

28773..29093
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GK59_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KFM15035.1}; TaxID=1502294 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-
SCF62.22; hypothetical protein
sw_12_scaffold_90_25
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

29190..30101
DNA (912bp) protein (304aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000376EBFD
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:KIJ84455.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB
sw_12_scaffold_90_26
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

30098..30748
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI0003648CC1
GlcNAc-PI de-N-acetylase {ECO:0000313|EMBL:KIJ81243.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
putative LmbE-like protein
sw_12_scaffold_90_27
unknown

Not on your lists

31096..31341
DNA (246bp) protein (82aa)

This feature has no annotations

sw_12_scaffold_90_28
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

31477..32565
DNA (1089bp) protein (363aa)
restriction endonuclease or methylase n=1 Tax=Salisaeta longa RepID=UPI0003B3AFB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET65302.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundi
sw_12_scaffold_90_29
unknown

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comp(32904..33539)
DNA (636bp) protein (212aa)

This feature has no annotations

sw_12_scaffold_90_30
unknown

Not on your lists

33592..34158
DNA (567bp) protein (189aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

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