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sw_12_scaffold_93

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_93_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

298..1176
DNA (879bp) protein (293aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA76_SALRM
hypothetical protein
sw_12_scaffold_93_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1231..2628
DNA (1398bp) protein (466aa)
ppiD; peptidyl-prolyl cis-trans isomerase surA; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] id=24659760 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
ppiD; peptidyl-prolyl cis-trans isomerase surA
sw_12_scaffold_93_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2845..3840
DNA (996bp) protein (332aa)
MoxR-like transcriptional regulator protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA78_SALRM
moxR; moxR-like transcriptional regulator protein
MoxR-like transcriptional regulator protein {ECO:0000313|EMBL:CBH24933.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
sw_12_scaffold_93_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4020..4787
DNA (768bp) protein (256aa)
nqrF; Na(+)-translocating NADH-quinone reductase subunit F; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] id=24659762 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
nqrF; Na(+)-translocating NADH-quinone reductase subunit F
Na(+)-translocating NADH-quinone reductase subunit F {ECO:0000313|EMBL:CBH24934.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
sw_12_scaffold_93_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4978..6813
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S193_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44927.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_93_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7195..10572)
DNA (3378bp) protein (1126aa)
RNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B6C1AC
ASPIC/UnbV domain protein {ECO:0000313|EMBL:AHG93778.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ASPIC/UnbV domain protein
sw_12_scaffold_93_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10717..12168)
DNA (1452bp) protein (484aa)
RagB/SusD domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI7_RHOM4
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACY48645.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sourc
sw_12_scaffold_93_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12281..15322)
DNA (3042bp) protein (1014aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI8_RHOM4
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACY48646.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
sw_12_scaffold_93_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15808..17091
DNA (1284bp) protein (428aa)
glgC; glucose-1-phosphate adenylyltransferase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] id=24657854 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glucose-1-phosphate adenylyltransferase {ECO:0000256|RuleBase:RU003565, ECO:0000256|SAAS:SAAS00055636}; EC=2.7.7.27 {ECO:0000256|RuleBase:RU003565, ECO:0000256|SAAS:SAAS00055636};; TaxID=761659 specie
glgC; glucose-1-phosphate adenylyltransferase
sw_12_scaffold_93_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17238..18467
DNA (1230bp) protein (410aa)
glycosyl transferase family protein
rfaG; group 1 glycosyl transferase id=24657855 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl transferase group 1 {ECO:0000313|EMBL:CBH25064.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_93_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18579..18854)
DNA (276bp) protein (92aa)
hypothetical protein
hypothetical protein id=24657858 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44890.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_93_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18986..20149)
DNA (1164bp) protein (388aa)
L-aminopeptidase/D-esterase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL3_SALRM
L-aminopeptidase/D-esterase
L-aminopeptidase/D-esterase {ECO:0000313|EMBL:CBH25068.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_93_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20312..20887
DNA (576bp) protein (192aa)
rpoE; RNA polymerase sigma factor
RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24657860 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH25069.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_12_scaffold_93_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21169..21621)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25070.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_93_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21836..23551
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25071.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_93_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23682..24362
DNA (681bp) protein (227aa)
UPF0173 metal-dependent hydrolase SRM_02151 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL7_SALRM
metal-dependent hydrolase
UPF0173 metal-dependent hydrolase SRM_02151 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" s
sw_12_scaffold_93_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24410..24982
DNA (573bp) protein (191aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
Putative phosphoesterase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL8_SALRM
phosphoesterase
sw_12_scaffold_93_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24979..25617
DNA (639bp) protein (213aa)
hypothetical protein id=24657866 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25074.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_93_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25948..27237)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25075.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_93_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27364..28095
DNA (732bp) protein (244aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494, ECO:0000313|EMBL:CBH25076.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Probable transaldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM1_SALRM
tal; transaldolase
sw_12_scaffold_93_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28255..29715
DNA (1461bp) protein (487aa)
Ysh1p: subunit of polyadenylation factor I
Ysh1p: subunit of polyadenylation factor I id=24657869 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ysh1p: subunit of polyadenylation factor I, putative {ECO:0000313|EMBL:ABC46323.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
sw_12_scaffold_93_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29865..32810
DNA (2946bp) protein (982aa)
Glycolate oxidase subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM3_SALRM
Glycolate oxidase subunit {ECO:0000313|EMBL:CBH25078.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
glcD; glycolate oxidase subunit
sw_12_scaffold_93_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33090..33764)
DNA (675bp) protein (225aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:ABC44719.1}; EC=3.4.21.- {ECO:0000313|EMBL:ABC44719.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
Carboxyl-terminal protease n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S178_SALRD
ctp; carboxyl-terminal protease
sw_12_scaffold_93_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33761..34732)
DNA (972bp) protein (324aa)
ctpA; carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=24657871 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Carboxyl-terminal protease {ECO:0000313|EMBL:CBH25079.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CBH25079.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
ctpA; carboxyl-terminal protease
sw_12_scaffold_93_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(35008..35709)
DNA (702bp) protein (234aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000255|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000255|HAMAP-Rule:M
Protein-L-isoaspartate O-methyltransferase n=2 Tax=Salinibacter ruber RepID=PIMT_SALRD
pcm; protein-L-isoaspartate (D-aspartate) O-methyltransferase
sw_12_scaffold_93_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(35733..36533)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25082.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_12_scaffold_93_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(36801..37727)
DNA (927bp) protein (309aa)
folP; dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15] id=24657875 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CBH25083.1}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205, ECO:0000313|EMBL:CBH2508
folP; dihydropteroate synthase
sw_12_scaffold_93_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

37927..39468
DNA (1542bp) protein (514aa)
GH3 auxin-responsive promoter superfamily {ECO:0000313|EMBL:CBH25084.1}; EC=6.3.2.- {ECO:0000313|EMBL:CBH25084.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
GH3 auxin-responsive promoter superfamily n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM9_SALRM
GH3; GH3 auxin-responsive promoter superfamily
sw_12_scaffold_93_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

39728..40543
DNA (816bp) protein (272aa)
rpoD; RNA polymerase sigma-70 factor
rpoD; RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor id=24657877 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CBH25085.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
sw_12_scaffold_93_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

40796..42301
DNA (1506bp) protein (502aa)
Long-chain fatty acid transport protein [Precursor] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAN2_SALRM
fadL; Long-chain fatty acid transport protein
Long-chain fatty acid transport protein [Precursor] {ECO:0000313|EMBL:CBH25087.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
Displaying items 1-30 of 41 in total

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