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sw_12_scaffold_239_9

Organism: SW_12_Salinibacter_ruber_64_31

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 7535..7825

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ26_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 73.0
  • Bit_score: 65
  • Evalue 4.10e-08
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Caldithrix_48_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.8
  • Coverage: 83.0
  • Bit_score: 66
  • Evalue 3.30e-08
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 73.0
  • Bit_score: 65
  • Evalue 1.10e-08

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Taxonomy

RBG_16_Caldithrix_48_16_curated → Caldithrix → Bacteria

Sequences

DNA sequence
Length: 291
GTGGTCGAAACGGCCGAGGGCCGGCAGCGGCGCGACATCGTGCGCGAGGACGTGGTCGAAACGGCCGAGGGCCGGCAGCGGCGCGACATCGTGCGCTATGGGATCGGGGCCCTGTCGGAGCACTACCGAACCGCTCTCACGCTGTATCATTTGGAGGGGATGAGCGTATCACAGATTAGCGAGGTCATGGACAACCCCGAGGGCACGGTGAAGAGCCATCTGTACCGGGGGCGCAAAAAGCTGAAGGACTGGGTACTGGACCGCTACCAACGCGAGGAGATCACGGTATGA
PROTEIN sequence
Length: 97
VVETAEGRQRRDIVREDVVETAEGRQRRDIVRYGIGALSEHYRTALTLYHLEGMSVSQISEVMDNPEGTVKSHLYRGRKKLKDWVLDRYQREEITV*