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sw_12_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_10_1
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(376..903)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002F15C43
metal-binding protein
Uncharacterized metal-binding protein {ECO:0000313|EMBL:AFY79220.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_10_trna_1
unknown

Not on your lists

992..1063
DNA (72bp)
transferRNA
sw_12_scaffold_10_2
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1137..1496
DNA (360bp) protein (120aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W0D0_9CYAN
sw_12_scaffold_10_3
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1654..2388
DNA (735bp) protein (245aa)
DNA replication and repair protein RadC n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WIK8_9CYAN
DNA replication and repair protein RadC
DNA replication and repair protein RadC {ECO:0000313|EMBL:AFZ19372.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PC
sw_12_scaffold_10_4
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2385..3662)
DNA (1278bp) protein (426aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TU44_9CYAN
RND transporter {ECO:0000313|EMBL:KIF17273.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
RND family efflux transporter MFP subunit
sw_12_scaffold_10_5
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3794..5287)
DNA (1494bp) protein (498aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YG61_HALP7
sw_12_scaffold_10_6
unknown

Not on your lists

5625..5849
DNA (225bp) protein (75aa)

This feature has no annotations

sw_12_scaffold_10_7
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6095..6700
DNA (606bp) protein (202aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XFP2_9CHRO
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AFZ30487.1}; Flags: Precursor;; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeoca
sw_12_scaffold_10_8
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6797..6979)
DNA (183bp) protein (61aa)
High light inducible protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XET7_9CHRO
high light inducible protein
High light inducible protein {ECO:0000313|EMBL:AFZ31023.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
sw_12_scaffold_10_9
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

7571..8575
DNA (1005bp) protein (335aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T2X5_9CYAN
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AFY76763.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_10_10
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8875..9345)
DNA (471bp) protein (157aa)
Photosystem II protein PsbQ n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YQ09_DACSA
photosystem II protein PsbQ
Photosystem II protein PsbQ {ECO:0000313|EMBL:AFZ49016.1}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococ
sw_12_scaffold_10_11
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9422..10126)
DNA (705bp) protein (235aa)
Hydrolase, alpha/beta fold family, putative n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VYQ4_9CYAN
Hydrolase, alpha/beta fold family, putative {ECO:0000313|EMBL:EDX73029.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofascic
alpha/beta hydrolase
sw_12_scaffold_10_12
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10412..10816)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKW2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ20828.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_12_scaffold_10_13
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11132..12394)
DNA (1263bp) protein (421aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculu
cysteine desulfurase-like protein, SufS subfamily (EC:2.8.1.7)
Cysteine desulfurase, SufS subfamily n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VT99_9CYAN
sw_12_scaffold_10_14
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(12470..13897)
DNA (1428bp) protein (476aa)
FeS assembly protein SufD n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TBZ6_9CYAN
FeS assembly protein SufD
FeS assembly protein SufD {ECO:0000313|EMBL:AFY79656.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_10_15
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13894..14685)
DNA (792bp) protein (264aa)
transporter n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00036F7F4B
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:AFZ44319.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strai
sw_12_scaffold_10_16
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14854..16299)
DNA (1446bp) protein (482aa)
FeS assembly protein SufB n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YV21_DACSA
FeS assembly protein SufB
FeS assembly protein SufB {ECO:0000313|EMBL:AFZ49973.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 830
sw_12_scaffold_10_17
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16459..17124
DNA (666bp) protein (222aa)
Iron-sulfur cluster biosynthesis transcriptional regulator SufR n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VTA3_9CYAN
Iron-sulfur cluster biosynthesis transcriptional regulator SufR {ECO:0000313|EMBL:EDX74927.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;"
iron-sulfur cluster biosynthesis transcriptional regulator SufR
sw_12_scaffold_10_18
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17121..17381
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKQ5_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ20077.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_12_scaffold_10_19
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17293..17853)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TQL1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY85152.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
sw_12_scaffold_10_20
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18152..19747)
DNA (1596bp) protein (532aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W435_9CYAN
sw_12_scaffold_10_21
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19942..21027
DNA (1086bp) protein (362aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YVT6_DACSA
branched-chain amino acid ABC transporter permease
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:AFZ51041.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcop
sw_12_scaffold_10_22
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21017..21838
DNA (822bp) protein (274aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T9A0_9CYAN
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:KJH72021.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacte
branched-chain amino acid ABC transporter ATPase
sw_12_scaffold_10_23
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

21874..22395
DNA (522bp) protein (174aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Fischerella sp. JSC-11 RepID=G6FPV0_9CYAN
sw_12_scaffold_10_24
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22405..23337
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EJS5_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKU97484.1}; Flags: Precursor;; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp
hypothetical protein
sw_12_scaffold_10_25
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(23384..23851)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T3X1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY76816.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_10_26
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23851..25074)
DNA (1224bp) protein (408aa)
membrane protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI0003499EDD
hypothetical protein
UPF0754 membrane protein PCC8801_0398; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (st
sw_12_scaffold_10_27
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(25255..25989)
DNA (735bp) protein (245aa)
Demethylmenaquinone methyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T7K8_9CYAN
ubiquinone/menaquinone biosynthesis methyltransferase
Ubiquinone/menaquinone biosynthesis methyltransferase {ECO:0000313|EMBL:AFY78862.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_10_28
unknown

Not on your lists

comp(26431..26526)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_12_scaffold_10_29
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

27120..27443
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T5M5_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY77723.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
Displaying items 1-30 of 50 in total

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