ggKbase home page

sw_12_scaffold_1009

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1009_1
unknown

Not on your lists

1..150
DNA (150bp) protein (50aa)

This feature has no annotations

sw_12_scaffold_1009_2
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

185..523
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CFE9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ42342.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
sw_12_scaffold_1009_3
unknown

Not on your lists

931..1155
DNA (225bp) protein (75aa)

This feature has no annotations

sw_12_scaffold_1009_4
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1190..1645
DNA (456bp) protein (152aa)
Genome sequencing data, contig C301 n=1 Tax=Microcystis aeruginosa PCC 9808 RepID=I4HKF1_MICAE
Genome sequencing data, contig C301 {ECO:0000313|EMBL:CCI22525.1}; TaxID=1160284 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa P
hypothetical protein
sw_12_scaffold_1009_5
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1701..2768)
DNA (1068bp) protein (356aa)
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000255|HAMAP-Rule:MF_00033}; EC=2.4.1.227 {ECO:0000255|HAMAP-Rule:MF_00033};;
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=MURG_CYAP7
sw_12_scaffold_1009_6
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2967..3806
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WHI3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ19234.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp.
sw_12_scaffold_1009_7
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3934..4596
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PDR1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY31106.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
sw_12_scaffold_1009_8
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4802..5548
DNA (747bp) protein (249aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
pyridoxine 5''''-phosphate synthase n=1 Tax=Mastigocladopsis repens RepID=UPI00030A5DB5
sw_12_scaffold_1009_9
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5636..5980
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YE38_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ44737.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_12_scaffold_1009_trna_1
unknown

Not on your lists

comp(6144..6228)
DNA (85bp)
transferRNA
sw_12_scaffold_1009_10
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(6269..7201)
DNA (933bp) protein (311aa)
DNA repair exonuclease n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T257_9CYAN
DNA repair exonuclease
DNA repair exonuclease {ECO:0000313|EMBL:AFY76952.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_1009_11
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7780..7887)
DNA (108bp) protein (36aa)
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGA80343.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vie
sw_12_scaffold_1009_12
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7863..8315)
DNA (453bp) protein (151aa)
Major facilitator superfamily MFS_1 n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U9F7_9CYAN
MFS transporter {ECO:0000313|EMBL:KIF22144.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
major facilitator superfamily protein
sw_12_scaffold_1009_13
Cyanobacterium stanieri, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8384..8533)
DNA (150bp) protein (50aa)
Major facilitator superfamily MFS_1 n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z5H4_CYAAP
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AFZ48382.1}; TaxID=292563 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium stanier
sw_12_scaffold_1009_14
unknown

Not on your lists

8757..8903
DNA (147bp) protein (49aa)

This feature has no annotations

sw_12_scaffold_1009_15
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9330..9686
DNA (357bp) protein (119aa)
Transcriptional regulator, LysR family n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I5R5_9BACL
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFM12307.1}; TaxID=717606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlano
transcriptional regulator
Displaying 16 items

View Taxonomy