ggKbase home page

sw_12_scaffold_102

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_102_1
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(154..945)
DNA (792bp) protein (264aa)
cobalamin-5'-phosphate synthase (EC:2.7.8.26)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
Cobalamin synthase n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XTG7_STAC7
sw_12_scaffold_102_2
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1143..1589
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VTI9_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX74764.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
hypothetical protein
sw_12_scaffold_102_3
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1730..2734
DNA (1005bp) protein (335aa)
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WGR2_9CYAN
sw_12_scaffold_102_4
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2817..4091)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002F26FF4
Zn-dependent peptidase
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AFZ21727.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;
sw_12_scaffold_102_5
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4298..5722)
DNA (1425bp) protein (475aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=395961 species="Bacte
Glycogen synthase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HP74_CYAP4
glgA; glycogen synthase
sw_12_scaffold_102_6
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(5897..6865)
DNA (969bp) protein (323aa)
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
Porphobilinogen deaminase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TBE7_9CYAN
sw_12_scaffold_102_7
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7294..7551
DNA (258bp) protein (86aa)
CopG family transcriptional regulator n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000349FF91
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY32390.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
sw_12_scaffold_102_8
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7734..8135
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WD49_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ18138.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_12_scaffold_102_9
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8391..9191)
DNA (801bp) protein (267aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WNW5_9CYAN
phosphohydrolase
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase
sw_12_scaffold_102_trna_1
unknown

Not on your lists

9653..9723
DNA (71bp)
transferRNA
sw_12_scaffold_102_10
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(9792..10820)
DNA (1029bp) protein (343aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T578_9CYAN
sw_12_scaffold_102_11
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10995..11465
DNA (471bp) protein (157aa)
Rare lipoprotein A n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XX40_STAC7
Rare lipoprotein A {ECO:0000313|EMBL:AKE65223.1}; TaxID=1641812 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa NIES-2549.;"
rare lipoprotein A
sw_12_scaffold_102_12
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11472..12032
DNA (561bp) protein (187aa)
Rare lipoprotein A n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IMZ3_9CHRO
Rare lipoprotein A {ECO:0000313|EMBL:EAZ92246.1}; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
rare lipoprotein A
sw_12_scaffold_102_13
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

12216..13832
DNA (1617bp) protein (539aa)
Bifunctional pantoate ligase/cytidylate kinase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T689_9CYAN
cytidylate kinase/pantoate--beta-alanine ligase
Bifunctional pantoate ligase/cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_01349}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_102_14
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(14098..15156)
DNA (1059bp) protein (353aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=118163 species="Bacteria; Cyanobac
Biotin synthase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T9A6_9CYAN
biotin synthetase
sw_12_scaffold_102_15
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15274..15693)
DNA (420bp) protein (140aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinaliu
DNA gyrase subunit A n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VWL8_9CYAN
sw_12_scaffold_102_16
unknown

Not on your lists

15789..16019
DNA (231bp) protein (77aa)

This feature has no annotations

sw_12_scaffold_102_17
unknown

Not on your lists

16103..16336
DNA (234bp) protein (78aa)

This feature has no annotations

sw_12_scaffold_102_18
unknown

Not on your lists

16487..16717
DNA (231bp) protein (77aa)

This feature has no annotations

sw_12_scaffold_102_19
unknown

Not on your lists

comp(16808..17032)
DNA (225bp) protein (75aa)

This feature has no annotations

sw_12_scaffold_102_20
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists


comp(17334..19913)
DNA (2580bp) protein (860aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocaps
DNA gyrase subunit A n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T3X2_9CYAN
DNA gyrase subunit A
sw_12_scaffold_102_21
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

20354..21271
DNA (918bp) protein (306aa)
Deacetylase, histone deacetylase/acetoin utilization protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9SY54_9CYAN
deacetylase
Deacetylase, histone deacetylase/acetoin utilization protein {ECO:0000313|EMBL:AFY75567.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 73
sw_12_scaffold_102_22
unknown

Not on your lists

comp(21279..21374)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_12_scaffold_102_23
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

21493..22605
DNA (1113bp) protein (371aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1479485 species="Bacteri
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=AROB_NOSP7
sw_12_scaffold_102_24
unknown

Not on your lists

22694..22882
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 25 items

View Taxonomy