ggKbase home page

sw_12_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 36 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_143_1
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

857..1507
DNA (651bp) protein (217aa)
Response regulator receiver protein n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DQP8_9CHRO
Response regulator receiver protein {ECO:0000313|EMBL:ERN43147.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacunae KOR
two-component response regulator
sw_12_scaffold_143_trna_1
unknown

Not on your lists

1593..1664
DNA (72bp)
transferRNA
sw_12_scaffold_143_2
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists

comp(1836..2519)
DNA (684bp) protein (228aa)
SCP-like extracellular n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XR69_STAC7
SCP-like extracellular Tax=CG_Cyano_01
SCP-like extracellular
sw_12_scaffold_143_3
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

3386..3853
DNA (468bp) protein (156aa)
putative acetyltransferase (EC:4.1.2.40)
GCN5-related N-acetyltransferase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRF6_TRURR
N-acetyltransferase GCN5 Tax=RBG_16_Chloroflexi_51_9_curated
sw_12_scaffold_143_4
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(3974..4717)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T5Q9_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY77860.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_143_5
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5148..5774
DNA (627bp) protein (209aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VX67_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIF21765.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
sw_12_scaffold_143_6
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5969..6583)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Nostoc sp. PCC 7107 RepID=K9Q7K1_9NOSO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY41116.1}; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
sw_12_scaffold_143_7
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7093..8310)
DNA (1218bp) protein (406aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00088795};; 1-hydroxy-2-methyl-2
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YTE7_LYNSP
sw_12_scaffold_143_8
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8683..9753)
DNA (1071bp) protein (357aa)
DRTGG domain protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VYM0_9CYAN
DRTGG domain-containing protein
DRTGG domain protein {ECO:0000313|EMBL:AFZ12265.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
sw_12_scaffold_143_9
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9770..10147)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 PF3_9CYAN">RepID=K9WPF3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ21654.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_12_scaffold_143_10
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10748..11368
DNA (621bp) protein (207aa)
Sporulation/spore germination protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WDN4_9CYAN
sporulation/spore germination protein
Sporulation/spore germination protein {ECO:0000313|EMBL:AFZ17916.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC
sw_12_scaffold_143_11
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11794..12891)
DNA (1098bp) protein (366aa)
Putative oxidoreductase of aldo/keto reductase family n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W9S7_9CYAN
oxidoreductase of aldo/keto reductase family
Putative oxidoreductase of aldo/keto reductase family {ECO:0000313|EMBL:AFZ17115.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcol
sw_12_scaffold_143_12
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13039..13542)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YR28_DACSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ49386.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.
sw_12_scaffold_143_13
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

13878..14528
DNA (651bp) protein (217aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase alpha chain {ECO:0000313|EMBL:AFY78563.1}; EC=2.5.1.9 {ECO:0000313|EMBL:AFY78563.1};; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleuroca
Riboflavin synthase alpha chain n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T810_9CYAN
sw_12_scaffold_143_14
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14644..14763
DNA (120bp) protein (40aa)
Cytochrome b6-f complex subunit 7 {ECO:0000256|HAMAP-Rule:MF_00396}; Cytochrome b6-f complex subunit PetM {ECO:0000256|HAMAP-Rule:MF_00396}; Cytochrome b6-f complex subunit VII {ECO:0000256|HAMAP-Rule
sw_12_scaffold_143_15
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(14760..15644)
DNA (885bp) protein (295aa)
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:
Indole-3-glycerol phosphate synthase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T8I6_9CYAN
sw_12_scaffold_143_16
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(15695..17134)
DNA (1440bp) protein (480aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nost
Dihydrolipoyl dehydrogenase n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YN25_NOSS1
sw_12_scaffold_143_17
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17185..17973)
DNA (789bp) protein (263aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UEX2_CYAP2
tRNA/rRNA methyltransferase (SpoU)
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ADN13102.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC
sw_12_scaffold_143_trna_2
unknown

Not on your lists

comp(18069..18152)
DNA (84bp)
transferRNA
sw_12_scaffold_143_18
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

18378..19724
DNA (1347bp) protein (449aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T5F8_9CYAN
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
sw_12_scaffold_143_19
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

20383..20646
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IY44_NOSP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC84643.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
sw_12_scaffold_143_20
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(20639..21724)
DNA (1086bp) protein (362aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA dimethylallyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T1N8_9CYAN
tRNA isopentenyltransferase MiaA
sw_12_scaffold_143_21
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21756..23681
DNA (1926bp) protein (642aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1173027 species="Bacteria; C
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WA58_9CYAN
sw_12_scaffold_143_22
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23766..25433)
DNA (1668bp) protein (556aa)
Cyanobacterial porin n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XFB1_9CHRO
cyanobacterial porin
Cyanobacterial porin {ECO:0000313|EMBL:AFZ31173.1}; Flags: Precursor;; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 74
sw_12_scaffold_143_23
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26236..26802
DNA (567bp) protein (189aa)
Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DP62_9CHRO
Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase {ECO:0000313|EMBL:ERN42617.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Ru
cAMP-binding protein
sw_12_scaffold_143_24
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26839..28056
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WHN2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ19688.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_12_scaffold_143_25
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28099..28245
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W1G3_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX71897.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
sw_12_scaffold_143_26
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(28634..29407)
DNA (774bp) protein (258aa)
protein gufA n=1 Tax=Chlorogloeopsis RepID=UPI0003609DD3
Protein gufA {ECO:0000313|EMBL:KIE06695.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
zinc/iron permease
sw_12_scaffold_143_27
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(29574..30530)
DNA (957bp) protein (319aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WLX8_9CYAN
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AFZ21415.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" so
sw_12_scaffold_143_28
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

30780..31871
DNA (1092bp) protein (364aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluste
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YHP2_HALP7
hypothetical protein
Displaying items 1-30 of 36 in total

View Taxonomy