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sw_12_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_27_1
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(2..127)
DNA (126bp) protein (42aa)
Glr3252 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NGC0_GLOVI
transposase
Glr3252 protein {ECO:0000313|EMBL:BAC91193.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
sw_12_scaffold_27_2
unknown

Not on your lists

678..830
DNA (153bp) protein (51aa)

This feature has no annotations

sw_12_scaffold_27_3
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1209..1451)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YF75_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ45514.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
sw_12_scaffold_27_4
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1711..2880
DNA (1170bp) protein (390aa)
GCN5-related N-acetyltransferase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VXW0_9CYAN
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AFZ12953.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 93
sw_12_scaffold_27_5
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4025..4177
DNA (153bp) protein (51aa)
putative transposase, fragment n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484B8F
Putative uncharacterized protein {ECO:0000313|EMBL:EDX74709.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
transposase
sw_12_scaffold_27_6
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4212..4520
DNA (309bp) protein (103aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; Flags: Precursor;; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycid
Cytosine-specific methyltransferase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XIS4_9CHRO
DNA-cytosine methyltransferase
sw_12_scaffold_27_7
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4816..5196
DNA (381bp) protein (127aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; Flags: Precursor;; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycid
Cytosine-specific methyltransferase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XIS4_9CHRO
DNA-cytosine methyltransferase
sw_12_scaffold_27_8
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5302..8067)
DNA (2766bp) protein (922aa)
DNA mismatch repair protein MutS n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T1V3_9CYAN
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;
mismatch repair ATPase
sw_12_scaffold_27_9
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8474..8821
DNA (348bp) protein (116aa)
Transposase, IS605 OrfB family n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7K7A4_CYAP7
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ACK69672.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424)
sw_12_scaffold_27_10
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8899..9648
DNA (750bp) protein (250aa)
Transposase, IS605 OrfB family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y6B6_HALP7
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AFZ42339.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp.
sw_12_scaffold_27_11
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9712..10152)
DNA (441bp) protein (147aa)
Single-stranded DNA-specific exonuclease n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W7S4_9CYAN
single-stranded DNA-specific exonuclease
Single-stranded DNA-specific exonuclease {ECO:0000313|EMBL:AFZ16268.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. P
sw_12_scaffold_27_12
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10166..12238)
DNA (2073bp) protein (691aa)
Putative exonuclease, RecJ n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VUL4_9CYAN
exonuclease, RecJ
Putative exonuclease, RecJ {ECO:0000313|EMBL:AFZ11162.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
sw_12_scaffold_27_13
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12638..13069
DNA (432bp) protein (144aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscilla
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9SE90_9CYAN
FKBP-type peptidylprolyl isomerase
sw_12_scaffold_27_14
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13155..14150)
DNA (996bp) protein (332aa)
Putative glutathione S-transferase n=1 Tax=Moorea producens 3L RepID=F4XVD4_9CYAN
Putative glutathione S-transferase {ECO:0000313|EMBL:EGJ31482.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
glutathione S-transferase
sw_12_scaffold_27_15
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(14223..14519)
DNA (297bp) protein (99aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XRE2_STAC7
sw_12_scaffold_27_16
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14663..15184)
DNA (522bp) protein (174aa)
phosphoribulokinase n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003471DCF
photosystem I assembly protein Ycf3
Photosystem I assembly protein Ycf3 {ECO:0000255|HAMAP-Rule:MF_00439}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain
sw_12_scaffold_27_17
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15689..16060
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UJE7_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EGK86392.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
protein of unknown function DUF820
sw_12_scaffold_27_18
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16511..18928
DNA (2418bp) protein (806aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
phosphoribosylglycinamide synthetase n=1 Tax=Scytonema hofmanni RepID=UPI00034BE871
phosphoribosylformylglycinamidine synthase II
sw_12_scaffold_27_19
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19083..20573
DNA (1491bp) protein (497aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VUA8_9CYAN
sw_12_scaffold_27_20
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(20853..21434)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TAF1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY79116.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_27_21
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(21627..21908)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000348A169
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY79117.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_27_22
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21974..24364)
DNA (2391bp) protein (797aa)
Heavy metal translocating P-type ATPase subfamily n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W4L9_9CYAN
Heavy metal translocating P-type ATPase subfamily {ECO:0000313|EMBL:EDX70878.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleo
ATPase P
sw_12_scaffold_27_23
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24406..25545)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W4L8_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX70895.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
hypothetical protein
sw_12_scaffold_27_24
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(25953..26702)
DNA (750bp) protein (250aa)
Methyltransferase, UbiE/COQ5 family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VJK9_9CYAN
Methyltransferase, UbiE/COQ5 family {ECO:0000313|EMBL:EDX77699.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus cht
methylase
sw_12_scaffold_27_25
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(26718..28421)
DNA (1704bp) protein (568aa)
ABC-type uncharacterized transport system, permease and ATPase component n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKY5_9CYAN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIE06397.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;
ABC transporter permease/ATPase
sw_12_scaffold_27_26
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(28418..29119)
DNA (702bp) protein (234aa)
Uracil-DNA glycosylase, family 4 n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W018_9CYAN
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EDX72450.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
uracil-DNA glycosylase, family 4
sw_12_scaffold_27_27
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

29234..30601
DNA (1368bp) protein (456aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales;
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TA99_9CYAN
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
sw_12_scaffold_27_28
Homo sapiens, Homo, Primates, Mammalia, Chordata, Metazoa

Not on your lists

comp(30621..31532)
DNA (912bp) protein (304aa)
PREDICTED: dentin sialophosphoprotein-like n=1 Tax=Latimeria chalumnae RepID=UPI0003C16A0C
Dentin sialophosphoprotein {ECO:0000313|EMBL:ABX82475.1}; Flags: Fragment;; TaxID=9606 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires;
cell surface SD repeat-containing protein
sw_12_scaffold_27_29
unknown

Not on your lists

comp(31844..31936)
DNA (93bp) protein (31aa)

This feature has no annotations

sw_12_scaffold_27_30
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(32143..32436)
DNA (294bp) protein (98aa)
Putative metal-binding protein (DUF2103) n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W7K1_9CYAN
hypothetical protein
Putative metal-binding protein (DUF2103) {ECO:0000313|EMBL:AFZ16188.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. P
Displaying items 1-30 of 48 in total

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