ggKbase home page

sw_12_scaffold_33

Search features with annotation key words

Displaying 29 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_33_1
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2..127
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IWR9_NOSP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC82925.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
sw_12_scaffold_33_2
unknown

Not on your lists

124..291
DNA (168bp) protein (56aa)

This feature has no annotations

sw_12_scaffold_33_3
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(286..1554)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WLH3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ20614.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_12_scaffold_33_4
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1563..1787)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WLH3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ20614.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
sw_12_scaffold_33_5
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(2014..3249)
DNA (1236bp) protein (412aa)
Cystathionine beta-lyase family protein involved in aluminum resistance n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T056_9CYAN
cystathionine beta-lyase family protein
Cystathionine beta-lyase family protein involved in aluminum resistance {ECO:0000313|EMBL:AFY75551.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa
sw_12_scaffold_33_6
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3356..4168
DNA (813bp) protein (271aa)
Delta-9 acyl-phospholipid desaturase (EC:1.14.19.-)
Delta-9 acyl-phospholipid desaturase {ECO:0000313|EMBL:AFZ08145.1}; EC=1.14.19.- {ECO:0000313|EMBL:AFZ08145.1};; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales;
Delta-9 acyl-phospholipid desaturase n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VLQ4_9CYAN
sw_12_scaffold_33_7
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4301..5293)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034AD80F
Sucrase ferredoxin {ECO:0000313|EMBL:KIJ75060.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
sucraseferredoxin family protein
sw_12_scaffold_33_8
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5327..6568)
DNA (1242bp) protein (414aa)
Major facilitator superfamily MFS_1 n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VT66_9CYAN
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AFZ11263.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC
sw_12_scaffold_33_9
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6649..7650)
DNA (1002bp) protein (334aa)
Periplasmic binding protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9X995_9CHRO
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:AFZ28674.1}; Flags: Precursor;; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp.
sw_12_scaffold_33_10
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7858..10422)
DNA (2565bp) protein (855aa)
TonB-dependent siderophore receptor n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WCU9_9CYAN
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:AFZ17621.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Mic
sw_12_scaffold_33_11
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(10469..11665)
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XVK4_9CYAN
Cupin {ECO:0000313|EMBL:KIJ83132.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
cupin 4
sw_12_scaffold_33_12
unknown

Not on your lists

comp(11781..11960)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_12_scaffold_33_13
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12295..12609)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI0003499467
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ31884.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
sw_12_scaffold_33_14
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12584..12901)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XTQ9_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ31885.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
sw_12_scaffold_33_15
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13175..14188)
DNA (1014bp) protein (338aa)
Transcriptional regulator, AraC family n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XIF7_9CHRO
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AFZ31851.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 742
sw_12_scaffold_33_16
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

14561..16060
DNA (1500bp) protein (500aa)
DNA phosphorothioation system restriction enzyme n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TBI4_9CYAN
DNA phosphorothioation system restriction enzyme
DNA phosphorothioation system restriction enzyme {ECO:0000313|EMBL:AFY79501.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_33_17
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16143..16364
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KAK7_CYAP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK68679.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synec
sw_12_scaffold_33_18
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

16361..18424
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TBT8_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY79464.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_33_19
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18642..20855)
DNA (2214bp) protein (738aa)
Photosystem I P700 chlorophyll a apoprotein A2 {ECO:0000256|HAMAP-Rule:MF_00482}; EC=1.97.1.12 {ECO:0000256|HAMAP-Rule:MF_00482};; PsaB {ECO:0000256|HAMAP-Rule:MF_00482}; TaxID=13035 species="Bacteria
Photosystem I P700 chlorophyll a apoprotein A2 n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YSX9_DACSA
photosystem I core protein PsaB
sw_12_scaffold_33_20
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20987..23239)
DNA (2253bp) protein (751aa)
Photosystem I P700 chlorophyll a apoprotein A1 {ECO:0000256|HAMAP-Rule:MF_00458}; EC=1.97.1.12 {ECO:0000256|HAMAP-Rule:MF_00458};; PsaA {ECO:0000256|HAMAP-Rule:MF_00458}; TaxID=65093 species="Bacteria
Photosystem I P700 chlorophyll a apoprotein A1 n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y6I1_HALP7
photosystem I core protein PsaA
sw_12_scaffold_33_21
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23610..24959
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WA98_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ16437.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp.
sw_12_scaffold_33_22
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25280..25765
DNA (486bp) protein (162aa)
Allophycocyanin alpha-B subunit apoprotein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YD01_HALP7
allophycocyanin alpha-B subunit apoprotein
Allophycocyanin alpha-B subunit apoprotein {ECO:0000313|EMBL:AFZ44719.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Ha
sw_12_scaffold_33_23
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25923..27254
DNA (1332bp) protein (444aa)
Peptidase M16 domain protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UI86_CYAP2
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ADN16854.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).
sw_12_scaffold_33_24
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

27283..27762
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000349D222
cytidyltransferase-related enzyme
Cytidyltransferase-related enzyme {ECO:0000313|EMBL:AFY81003.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PC
sw_12_scaffold_33_25
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

27891..28604
DNA (714bp) protein (238aa)
GUN4-like family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VJC0_9CYAN
GUN4-like family {ECO:0000313|EMBL:EDX78051.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 742
GUN4 domain protein
sw_12_scaffold_33_26
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28781..30196
DNA (1416bp) protein (472aa)
O-antigen polymerase n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KFI6_CYAP7
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ACK73311.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechoc
sw_12_scaffold_33_27
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(30388..31515)
DNA (1128bp) protein (376aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ACK71833.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ACK71833.1};; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyano
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KFB7_CYAP7
sw_12_scaffold_33_28
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

31781..32728
DNA (948bp) protein (316aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T7J5_9CYAN
Zn-dependent oxidoreductase
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:AFY77974.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_33_29
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(32917..33873)
DNA (957bp) protein (319aa)
Transposase IS891/IS1136/IS1341 family n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YGE8_HALP7
transposase IS891/IS1136/IS1341 family
Transposase IS891/IS1136/IS1341 family {ECO:0000313|EMBL:AFZ45470.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Haloth
Displaying 29 items

View Taxonomy