ggKbase home page

sw_12_scaffold_462

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_462_1
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1..90)
DNA (90bp) protein (30aa)
Transposase {ECO:0000313|EMBL:KIF13270.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
sw_12_scaffold_462_2
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(352..912)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002F1DB1E
Uncharacterized protein {ECO:0000313|EMBL:KIY12732.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
floX; flavodoxin
sw_12_scaffold_462_3
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(931..1434)
DNA (504bp) protein (168aa)
chemotaxis protein CheY n=1 Tax=Mastigocladopsis repens RepID=UPI0002D9A642
Chemotaxis protein CheY {ECO:0000313|EMBL:KIJ76458.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
response regulator receiver protein
sw_12_scaffold_462_4
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1664..2080)
DNA (417bp) protein (139aa)
chemotaxis protein CheY n=1 Tax=Fischerella muscicola RepID=UPI0002DEB833
Chemotaxis protein CheY {ECO:0000313|EMBL:KIF35915.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
thioredoxin reductase
sw_12_scaffold_462_5
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2175..2396)
DNA (222bp) protein (74aa)
chemotaxis protein CheY n=1 Tax=Scytonema hofmanni RepID=UPI00034A97CE
Chemotaxis protein CheY {ECO:0000313|EMBL:KJH70724.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
response regulator receiver protein
sw_12_scaffold_462_6
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2677..3066
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q10VR9_TRIEI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG53655.1}; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmium erythraeum (strain
sw_12_scaffold_462_7
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3358..5739
DNA (2382bp) protein (794aa)
phosphoketolase (EC:4.1.2.9)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeoca
Phosphoketolase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XF87_9CHRO
sw_12_scaffold_462_8
unknown

Not on your lists

comp(5750..5917)
DNA (168bp) protein (56aa)

This feature has no annotations

sw_12_scaffold_462_9
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5919..7118
DNA (1200bp) protein (400aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillato
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VSY4_9CYAN
sw_12_scaffold_462_10
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7275..8117)
DNA (843bp) protein (281aa)
Zn-dependent protease with chaperone function n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W856_9CYAN
Zn-dependent protease with chaperone function
Zn-dependent protease with chaperone function {ECO:0000313|EMBL:AFZ15954.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" s
sw_12_scaffold_462_11
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(8117..8539)
DNA (423bp) protein (141aa)
Putative transcriptional regulator n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T885_9CYAN
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFY78643.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_462_12
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8597..9268)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9Q0E0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY39185.1}; TaxID=111781 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7376.;"
sw_12_scaffold_462_13
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

10053..10976
DNA (924bp) protein (308aa)
TPR repeat protein n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M2C7_ANAVT
TPR repeat-containing protein
TPR repeat protein {ECO:0000313|EMBL:ABA24859.1}; Flags: Precursor;; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413
sw_12_scaffold_462_14
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11032..11226
DNA (195bp) protein (65aa)
Heavy metal transport detoxification protein n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VPT8_9CYAN
Heavy metal transport detoxification protein {ECO:0000313|EMBL:ESA32783.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya
hypothetical protein
sw_12_scaffold_462_15
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11297..11731)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034C0A8D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL47570.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC
sw_12_scaffold_462_16
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(11786..11941)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8L515_9SYNC
Uncharacterized protein {ECO:0000313|EMBL:KIF23929.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
sw_12_scaffold_462_17
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11945..12514)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YTJ7_DACSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ49443.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.
sw_12_scaffold_462_18
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12737..13426)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI0003734972
Transposase {ECO:0000313|EMBL:EKF03986.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
transposase IS891/IS1136/IS1341 family
Displaying 18 items

View Taxonomy