ggKbase home page

sw_12_scaffold_66

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_66_1
unknown

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)

This feature has no annotations

sw_12_scaffold_66_2
unknown

Not on your lists

comp(169..432)
DNA (264bp) protein (88aa)

This feature has no annotations

sw_12_scaffold_66_3
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

612..953
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DPU2_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:ERN42609.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacunae KORDI 51-2.;"
hypothetical protein
sw_12_scaffold_66_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1103..1771)
DNA (669bp) protein (223aa)
TrkA-N domain protein id=24613654 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
TrkA-N domain protein {ECO:0000313|EMBL:ESP89714.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
TrkA-N domain protein
sw_12_scaffold_66_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1937..3529)
DNA (1593bp) protein (531aa)
Cation transporter n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JCT2_HALJB
cation transporter
Cation transporter {ECO:0000313|EMBL:ADJ16827.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (st
sw_12_scaffold_66_6
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(4264..7290)
DNA (3027bp) protein (1009aa)
Exonuclease SbcC n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T5R3_9CYAN
Exonuclease SbcC {ECO:0000313|EMBL:AFY77865.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
exonuclease SbcC
sw_12_scaffold_66_7
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8076..9359)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034B3553
trypsin-like serine protease with C-terminal PDZ domain
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:AFZ18056.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Mi
sw_12_scaffold_66_8
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(9532..10872)
DNA (1341bp) protein (447aa)
Transporter id=2942355 bin=GWA1_Deltaproteobacteria_52_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
sodium:neurotransmitter symporter; K03308 neurotransmitter:Na+ symporter, NSS family Tax=GWA1_Bdellovibrionales_52_35_curated
transporter
sw_12_scaffold_66_9
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

11442..11900
DNA (459bp) protein (153aa)
Raf kinase inhibitor-like protein, YbhB/YbcL family n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T8D3_9CYAN
Raf kinase inhibitor-like protein, YbhB/YbcL family
Raf kinase inhibitor-like protein, YbhB/YbcL family {ECO:0000313|EMBL:AFY78371.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_12_scaffold_66_10
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11897..12226)
DNA (330bp) protein (110aa)
UPF0145 protein Mic7113_3814 n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WI98_9CYAN
hypothetical protein
UPF0145 protein Mic7113_3814 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.
sw_12_scaffold_66_11
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12559..14196)
DNA (1638bp) protein (546aa)
Choline/carnitine/betaine transport n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GU87_9GAMM
High-affinity choline uptake protein BetT {ECO:0000313|EMBL:KGE05173.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rub
choline/carnitine/betaine transport
sw_12_scaffold_66_12
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(14476..15000)
DNA (525bp) protein (175aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T4Y6_9CYAN
transcriptional regulator
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:AFY77191.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa
sw_12_scaffold_66_13
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(15773..16108)
DNA (336bp) protein (112aa)
Putative nucleic acid-binding protein, contains PIN domain n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T2P5_9CYAN
putative nucleic acid-binding protein, contains PIN domain
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:AFY76708.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327
sw_12_scaffold_66_14
unknown

Not on your lists

comp(16108..16371)
DNA (264bp) protein (88aa)

This feature has no annotations

sw_12_scaffold_66_15
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(16908..17282)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9UAG3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY91219.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
sw_12_scaffold_66_16
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17580..17969
DNA (390bp) protein (130aa)
Ferritin Dps family protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KK42_CYAP7
DNA starvation/stationary phase protection protein Dps
Ferritin Dps family protein {ECO:0000313|EMBL:ACK70927.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (S
sw_12_scaffold_66_17
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18084..18995
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002D3125E
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KIF35935.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
NmrA family protein
sw_12_scaffold_66_18
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19059..19526
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VZF4_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ESA37975.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;
DoxX family protein
sw_12_scaffold_66_19
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

19586..20293
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KZI4_9SYNC
NADP oxidoreductase coenzyme F420-dependent
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:AFZ58458.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC
sw_12_scaffold_66_20
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20395..21588
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00030587F1
Major facilitator superfamily protein {ECO:0000313|EMBL:ESA37907.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. He
major facilitator superfamily protein
sw_12_scaffold_66_21
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21744..23171
DNA (1428bp) protein (476aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S9Z7_9CYAN
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AFY66604.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema
sw_12_scaffold_66_22
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

23266..23667
DNA (402bp) protein (134aa)
S23 ribosomal protein n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8LYQ9_9CYAN
S23 ribosomal protein {ECO:0000313|EMBL:ELS02799.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
protein of unknown function TIGR02436
sw_12_scaffold_66_23
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23976..27146
DNA (3171bp) protein (1057aa)
RND transporter, HAE1 family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VK01_9CYAN
RND transporter, HAE1 family {ECO:0000313|EMBL:EDX77706.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonopla
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
sw_12_scaffold_66_24
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(27346..28140)
DNA (795bp) protein (265aa)
Transposase, IS4 family n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=A8ZN15_ACAM1
IS4 family transposase
Transposase, IS4 family {ECO:0000313|EMBL:ABW32214.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 1
sw_12_scaffold_66_25
unknown

Not on your lists

28223..28327
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 25 items

View Taxonomy