ggKbase home page

sw_12_scaffold_1152

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1152_1
unknown

Not on your lists

comp(3..179)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_12_scaffold_1152_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

303..584
DNA (282bp) protein (94aa)
50S ribosomal protein L44e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL44E_NATPD
rpl44e; 50S ribosomal protein L44e
50S ribosomal protein L44e; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 35678 / DSM 2160)
sw_12_scaffold_1152_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

587..760
DNA (174bp) protein (58aa)
30S ribosomal protein S27e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y229_NATM8
rps27e; 30S ribosomal protein S27e
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_12_scaffold_1152_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

825..1625
DNA (801bp) protein (267aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISI6_NATPD
tif2a; translation initiation factor IF-2 subunit alpha
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=348780 species="Arch
sw_12_scaffold_1152_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1978..2730
DNA (753bp) protein (251aa)
PAC2 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISI3_NATPD
hypothetical protein
PAC2 family protein {ECO:0000313|EMBL:CAI48903.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_12_scaffold_1152_6
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2750..3406
DNA (657bp) protein (219aa)
Heat shock protein DnaJ domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J683_HALJB
heat shock protein DnaJ domain-containing protein
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:ADJ15801.1}; Heat shock protein DnaJ domain-containing protein {ECO:0000313|EMBL:ELY37175.1}; TaxID=795797 species="Archaea; Euryarchaeota; Hal
sw_12_scaffold_1152_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3403..3615
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQS7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36522.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_12_scaffold_1152_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3746..4180
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JV56_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA11515.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
putative ester cyclase
sw_12_scaffold_1152_9
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4304..5167)
DNA (864bp) protein (288aa)
cysE1; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V628_HALMA
Serine acetyltransferase {ECO:0000313|EMBL:AJF27784.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_12_scaffold_1152_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5676..6959
DNA (1284bp) protein (428aa)
Para-aminobenzoate synthase component I n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAW2_9EURY
Para-aminobenzoate synthase component I {ECO:0000313|EMBL:ELZ32581.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeomet
anthranilate synthase
sw_12_scaffold_1152_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6959..7555
DNA (597bp) protein (199aa)
trpG2; anthranilate synthase component II (EC:4.1.3.27)
Anthranilate synthase component II n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAS5_9EURY
Anthranilate synthase component II {ECO:0000313|EMBL:ELZ32580.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
sw_12_scaffold_1152_12
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7697..9547)
DNA (1851bp) protein (617aa)
Glycine betaine transporter BetL n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V633_HALMA
betL1; glycine betaine transporter BetL
Glycine betaine transporter BetL {ECO:0000313|EMBL:AAV45019.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismor
sw_12_scaffold_1152_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9761..10990)
DNA (1230bp) protein (410aa)
Potassium channel-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0QT97_HALJP
Potassium channel-like protein {ECO:0000313|EMBL:EMA27803.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
potassium channel protein
sw_12_scaffold_1152_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11967..12896
DNA (930bp) protein (310aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Aldehyde ferredoxin oxidoreductase n=1 Tax=Halogranum salarium B-1 RepID=J3EWH8_9EURY
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:EJN59217.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_12_scaffold_1152_15
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13037..15097)
DNA (2061bp) protein (687aa)
Formate dehydrogenase subunit alpha n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XC01_9EURY
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:ELY58138.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amyl
formate dehydrogenase, alpha subunit, archaeal-type
sw_12_scaffold_1152_16
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15275..15844
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X8Q9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY58139.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_12_scaffold_1152_17
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15955..17334)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWZ5_9EURY
FAD linked oxidase domain protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:AFO56013.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-
sw_12_scaffold_1152_18
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17349..19079)
DNA (1731bp) protein (577aa)
fhs; formyltetrahydrofolate synthetase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1227452 sp
Formate--tetrahydrofolate ligase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KA80_9EURY
sw_12_scaffold_1152_19
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19179..19634)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C900_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ18394.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_12_scaffold_1152_20
unknown

Not on your lists

comp(19708..20001)
DNA (294bp) protein (98aa)

This feature has no annotations

sw_12_scaffold_1152_21
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20468..20761
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WU92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY53015.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_12_scaffold_1152_22
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21090..21527
DNA (438bp) protein (146aa)
Choline/carnitine/betaine transporter (Fragment) n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L9Y9S5_NATGS
choline/carnitine/betaine transport
Choline/carnitine/betaine transport {ECO:0000313|EMBL:AFZ74048.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium
Displaying 22 items

View Taxonomy