ggKbase home page

sw_12_scaffold_1317

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1317_1
unknown

Not on your lists

1..96
DNA (96bp) protein (32aa)

This feature has no annotations

sw_12_scaffold_1317_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

296..1603
DNA (1308bp) protein (436aa)
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2 (EC:2.5.1.77)
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2 {ECO:0000313|EMBL:CCQ37450.1}; EC=2.5.1.77 {ECO:0000313|EMBL:CCQ37450.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Hal
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XST9_NATM8
sw_12_scaffold_1317_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1628..2764)
DNA (1137bp) protein (379aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
FO synthase subunit 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRF3_NATPD
cofG; FO synthase subunit 1
sw_12_scaffold_1317_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2828..3427)
DNA (600bp) protein (200aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000255|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000255|HAMAP-Rule:MF_02114};; TaxID=348780
2-phospho-L-lactate guanylyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=COFC_NATPD
hypothetical protein
sw_12_scaffold_1317_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3428..4186)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR29_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36606.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_12_scaffold_1317_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4176..5345)
DNA (1170bp) protein (390aa)
FtsZ family protein, type III n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRF0_NATPD
ftsZ_4; cell division protein
FtsZ family protein, type III {ECO:0000313|EMBL:CAI49293.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_12_scaffold_1317_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5523..6716)
DNA (1194bp) protein (398aa)
ArNOG06768 family NADH-binding domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQZ2_NATM8
nolA1; arNOG06768 family NADH-binding domain protein
ArNOG06768 family NADH-binding domain protein {ECO:0000313|EMBL:CCQ36604.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
sw_12_scaffold_1317_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6781..7224)
DNA (444bp) protein (148aa)
rnhB; ribonuclease H, type 2 (EC:3.1.26.4)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
Ribonuclease n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLC1_NATM8
sw_12_scaffold_1317_9
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7361..7918)
DNA (558bp) protein (186aa)
DNA-binding protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00036B78F7
HoxA-like transcriptional regulator {ECO:0000313|EMBL:ERH01090.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07H
response regulator with chey-like receiver domain and winged-helix DNA-binding domain
sw_12_scaffold_1317_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8130..9365)
DNA (1236bp) protein (412aa)
pus10; tRNA pseudouridine synthase Pus10 (EC:5.4.99.-)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=268739 s
tRNA pseudouridine synthase Pus10 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRT9_NATM8
sw_12_scaffold_1317_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10089..10748
DNA (660bp) protein (220aa)
sugar nucleotidyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI000361D31A
nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:ACV47744.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_12_scaffold_1317_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10748..12541
DNA (1794bp) protein (598aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUY1_9EURY
sw_12_scaffold_1317_13
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12851..13003
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:ACV10849.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_12_scaffold_1317_14
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13312..13767)
DNA (456bp) protein (152aa)
PilT protein domain protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VRV3_9EURY
PilT protein domain protein {ECO:0000313|EMBL:ELY39712.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA
PilT protein domain protein
sw_12_scaffold_1317_15
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14601..14858)
DNA (258bp) protein (86aa)
UDP-glucose 4-epimerase (Fragment) n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W888_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ELY45704.1}; Flags: Fragment;; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubru
NAD-dependent epimerase/dehydratase
Displaying 15 items

View Taxonomy